RNA–Protein interactions for RNA: ENST00000454441.2

LINC01287-203, Transcript of long intergenic non-protein coding RNA 1287, humanhuman

TSL 5 BASIC

Gene LINC01287, Length 1,007 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01287-203ENST00000454441 NPHP3-ACAD11A0A0J9YXS1 232 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 SLC26A4O43511 780 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 PDGFBP01127 241 aaPredicted RBP13.03□□□□□ -0.32
LINC01287-203ENST00000454441 CUL4AQ13619 759 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 NOLC1Q14978 699 aaKnown RBP eCLIP13.03□□□□□ -0.32
LINC01287-203ENST00000454441 SF3A1Q15459 793 aaKnown RBP13.03□□□□□ -0.32
LINC01287-203ENST00000454441 UPP1Q16831 310 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 LIN9Q5TKA1 542 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 DCLRE1AQ6PJP8 1040 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 ALKAL1Q6UXT8 129 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 TMEM161BQ8NDZ6 487 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 ZNF707Q96C28 371 aaPredicted RBP13.03□□□□□ -0.32
LINC01287-203ENST00000454441 ZBTB45Q96K62 511 aaPredicted RBP13.03□□□□□ -0.32
LINC01287-203ENST00000454441 SNX27Q96L92 541 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 CLSTN3Q9BQT9 956 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 PRKD2Q9BZL6 878 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 SLC38A7Q9NVC3 462 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 LARSQ9P2J5 1176 aaKnown RBP13.03□□□□□ -0.32
LINC01287-203ENST00000454441 FBXW11Q9UKB1 542 aa13.03□□□□□ -0.32
LINC01287-203ENST00000454441 H0YCG3 227 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 ABLIM1O14639 778 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 TRAPPC3O43617 180 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 TOM1L1O75674 476 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 ZMYND10O75800 440 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 MAPTP10636 758 aaKnown RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 PDCP20941 246 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 FGFR3P22607 806 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 IGFBP6P24592 240 aaPredicted RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 LONP1P36776 959 aaKnown RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 MATR3P43243 847 aaKnown RBP eCLIP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 BRCC3P46736 316 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 VCPP55072 806 aaKnown RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 NHLH1Q02575 133 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 GRIN1Q05586 938 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 SOX4Q06945 474 aaPredicted RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 DHX8Q14562 1220 aaKnown RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 ARSHQ5FYA8 562 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 XKR4Q5GH76 650 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 IER5LQ5T953 404 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 GET4Q7L5D6 327 aaPredicted RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 GPBP1Q86WP2 473 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 C3orf58Q8NDZ4 430 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 BICD1Q96G01 975 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 ZMAT2Q96NC0 199 aaKnown RBP13.02□□□□□ -0.33
LINC01287-203ENST00000454441 PRRX2Q99811 253 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 REEP2Q9BRK0 252 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 KCNK12Q9HB15 430 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 CNTN3Q9P232 1028 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 ODF2LQ9ULJ1 636 aa13.02□□□□□ -0.33
LINC01287-203ENST00000454441 MYH15Q9Y2K3 1946 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 I3L4J1 428 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 PODXLO00592 558 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 CLDN3O15551 220 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 ADAM12O43184 909 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 N4BP1O75113 896 aaKnown RBP13.01□□□□□ -0.33
LINC01287-203ENST00000454441 FAM13AO94988 1023 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 PAPLNO95428 1278 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 KRT18P05783 430 aaKnown RBP13.01□□□□□ -0.33
LINC01287-203ENST00000454441 C8AP07357 584 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 KCNE1P15382 129 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 PLCG1P19174 1290 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 TKTP29401 623 aaKnown RBP13.01□□□□□ -0.33
LINC01287-203ENST00000454441 AVPR2P30518 371 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 OR1D2P34982 312 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 VASPP50552 380 aaPredicted RBP13.01□□□□□ -0.33
LINC01287-203ENST00000454441 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 TDGQ13569 410 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 KARSQ15046 597 aaKnown RBP13.01□□□□□ -0.33
LINC01287-203ENST00000454441 SEZ6Q53EL9 994 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 PPM1LQ5SGD2 360 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 CD300LGQ6UXG3 332 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 ZPBP2Q6X784 338 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 PRSS33Q8NF86 280 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 LRRC15Q8TF66 581 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 DDX27Q96GQ7 796 aaKnown RBP13.01□□□□□ -0.33
LINC01287-203ENST00000454441 IGSF9Q9P2J2 1179 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 MTRRQ9UBK8 725 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 CDY1Q9Y6F8 540 aa13.01□□□□□ -0.33
LINC01287-203ENST00000454441 K7ENM7 598 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 HNRNPA1P09651 372 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01287-203ENST00000454441 PTPN5P54829 565 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 MCL1Q07820 350 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 RAB33AQ14088 237 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 MCM6Q14566 821 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 ANKS3Q6ZW76 656 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 HAUS6Q7Z4H7 955 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 ALYREFQ86V81 257 aaKnown RBP13□□□□□ -0.33
LINC01287-203ENST00000454441 MYCT1Q8N699 235 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 LARP4BQ92615 738 aaKnown RBP13□□□□□ -0.33
LINC01287-203ENST00000454441 RAD54LQ92698 747 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 C18orf25Q96B23 403 aaPredicted RBP13□□□□□ -0.33
LINC01287-203ENST00000454441 MYADMQ96S97 322 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 MFSD1Q9H3U5 465 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 ZHX3Q9H4I2 956 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 PARVGQ9HBI0 331 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 BLOC1S4Q9NUP1 217 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13□□□□□ -0.33
LINC01287-203ENST00000454441 EPS15L1Q9UBC2 864 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 POLIQ9UNA4 740 aa13□□□□□ -0.33
LINC01287-203ENST00000454441 DUSP12Q9UNI6 340 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms