RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 BBOF1Q8ND07 529 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 STK32AQ8WU08 396 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 ART4Q93070 314 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 NT5C2P49902 561 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 PAPOLAP51003 745 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 PPP3CAQ08209 521 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 PKN2Q16513 984 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 ABCB5Q2M3G0 1257 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 VSTM1Q6UX27 236 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 PYROXD1Q8WU10 500 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 ARHGEF1Q92888 912 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 DDX4Q9NQI0 724 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 STK24Q9Y6E0 443 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 CHRM1P11229 460 aaPredicted RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 PTDSS1P48651 473 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 MRPS35P82673 323 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 POU5F1Q01860 360 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 MPP2Q14168 576 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 MTFR1Q15390 333 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 ZNF720Q7Z2F6 126 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 L3MBTL3Q96JM7 780 aaPredicted RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 FGD4Q96M96 766 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 TRIM55Q9BYV6 548 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 SYNCQ9H7C4 482 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 TOPORSQ9NS56 1045 aaPredicted RBP14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 SLC5A4Q9NY91 659 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 HSPBP1Q9NZL4 362 aa14.72□□□□□ -0.05
UBE2D3-210ENST00000453744 ZNF335Q9H4Z2 1342 aaPredicted RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 ZSCAN5DPP0CG00 497 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 KRT4P19013 534 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 ARFIP2P53365 341 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 YWHAGP61981 247 aaKnown RBP eCLIP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 ZNF394Q53GI3 561 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 RBM17Q96I25 401 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 PCDHB18PQ96TA0 734 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 TCHPQ9BT92 498 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 KIFC3Q9BVG8 833 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 EPB41L4BQ9H329 900 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 KCNMB3Q9NPA1 279 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 NCANO14594 1321 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 CHD4Q14839 1912 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 CCDC189A1A4V9 331 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 GTPBP10A4D1E9 387 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 HNRNPDLO14979 420 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 ZBED4O75132 1171 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 SNUPNO95149 360 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 GH2P01242 217 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 RANBP1P43487 201 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 PRELPP51888 382 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 MAB21L3Q8N8X9 362 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 FAM13CQ8NE31 585 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 ZNF483Q8TF39 744 aaPredicted RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 C12orf65Q9H3J6 166 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 DBNDD1Q9H9R9 158 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 PPARGC1AQ9UBK2 798 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 MARCOQ9UEW3 520 aaPredicted RBP14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 TJP1Q07157 1748 aa14.71□□□□□ -0.05
UBE2D3-210ENST00000453744 KIF3CO14782 793 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 GJB6O95452 261 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 RRM1P23921 792 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 KDSRQ06136 332 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 TBC1D16Q8TBP0 767 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 CCDC17Q96LX7 622 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 OSBPL8Q9BZF1 889 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 LRRC4BQ9NT99 713 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 HEY2Q9UBP5 337 aa14.71□□□□□ -0.06
UBE2D3-210ENST00000453744 CCDC195A0A1B0GUA6 201 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 MT-ND3P03897 115 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 FOXN2P32314 431 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 BASP1P80723 227 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 CBWD2Q8IUF1 395 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 DDX50Q9BQ39 737 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 GPRC5CQ9NQ84 441 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 WHRNQ9P202 907 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 PCDHB4Q9Y5E5 795 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 SIPA1L3O60292 1781 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 hCG_2014768A0A024R1R8 64 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 TAC1P20366 129 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 RHBDL3P58872 404 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 SPDYCQ5MJ68 293 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 C11orf63Q6NUN7 778 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 HAUS6Q7Z4H7 955 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 ARHGAP24Q8N264 748 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 RSAD2Q8WXG1 361 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 MKNK1Q9BUB5 465 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 CORO1CQ9ULV4 474 aaPredicted RBP14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 SPDYE5A6NIY4 337 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 THOC5Q13769 683 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 BLMHQ13867 455 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 RNF220Q5VTB9 566 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 SNX30Q5VWJ9 437 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 TMEM206Q9H813 350 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 R3HDM2Q9Y2K5 976 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 C2CD2Q9Y426 696 aa14.7□□□□□ -0.06
UBE2D3-210ENST00000453744 TMEM150BA6NC51 233 aa14.69□□□□□ -0.06
UBE2D3-210ENST00000453744 RPA3P35244 121 aaPredicted RBP14.69□□□□□ -0.06
UBE2D3-210ENST00000453744 PEX5P50542 639 aa14.69□□□□□ -0.06
UBE2D3-210ENST00000453744 PCNX4Q63HM2 1172 aa14.69□□□□□ -0.06
UBE2D3-210ENST00000453744 CENPUQ71F23 418 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms