RNA–Protein interactions for RNA: ENST00000452447.1

CHD3-206, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-206ENST00000452447 NOLC1Q14978 699 aaKnown RBP eCLIP14.1□□□□□ -0.15
CHD3-206ENST00000452447 ARSHQ5FYA8 562 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 XKR4Q5GH76 650 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 LIN9Q5TKA1 542 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 ZPBP2Q6X784 338 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 GPBP1Q86WP2 473 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 BICD1Q96G01 975 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 DDX27Q96GQ7 796 aaKnown RBP14.1□□□□□ -0.15
CHD3-206ENST00000452447 ZBTB45Q96K62 511 aaPredicted RBP14.1□□□□□ -0.15
CHD3-206ENST00000452447 SNX27Q96L92 541 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 CLSTN3Q9BQT9 956 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 GOLGA2P5Q9HBQ8 144 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 CLUHO75153 1309 aa14.1□□□□□ -0.15
CHD3-206ENST00000452447 ZMYND10O75800 440 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 FAM13AO94988 1023 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 PLCG1P19174 1290 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 KARSQ15046 597 aaKnown RBP14.09□□□□□ -0.15
CHD3-206ENST00000452447 HAUS6Q7Z4H7 955 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 MYCT1Q8N699 235 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 REEP2Q9BRK0 252 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 PRKD2Q9BZL6 878 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 PDCD11Q14690 1871 aaKnown RBP14.09□□□□□ -0.15
CHD3-206ENST00000452447 ABLIM1O14639 778 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 KCNE1P15382 129 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 FGFR3P22607 806 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 OR1D2P34982 312 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 NCKAP1LP55160 1127 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 GRIN1Q05586 938 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 PPM1LQ5SGD2 360 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 ANKS3Q6ZW76 656 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 RAD54LQ92698 747 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 ZNF707Q96C28 371 aaPredicted RBP14.09□□□□□ -0.15
CHD3-206ENST00000452447 ZMAT2Q96NC0 199 aaKnown RBP14.09□□□□□ -0.15
CHD3-206ENST00000452447 PRRX2Q99811 253 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 BACH2Q9BYV9 841 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 SMOC2Q9H3U7 446 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 ZHX3Q9H4I2 956 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 KCNK12Q9HB15 430 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 PARVGQ9HBI0 331 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.09□□□□□ -0.15
CHD3-206ENST00000452447 CNTN3Q9P232 1028 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 FBXW11Q9UKB1 542 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 NUB1Q9Y5A7 615 aa14.09□□□□□ -0.15
CHD3-206ENST00000452447 K7ENM7 598 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 PODXLO00592 558 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 TBCAO75347 108 aaKnown RBP14.08□□□□□ -0.16
CHD3-206ENST00000452447 PAPLNO95428 1278 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 SYT1P21579 422 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 SCP2P22307 547 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 TKTP29401 623 aaKnown RBP14.08□□□□□ -0.16
CHD3-206ENST00000452447 RPL9P32969 192 aaKnown RBP14.08□□□□□ -0.16
CHD3-206ENST00000452447 LIG4P49917 911 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 SOX4Q06945 474 aaPredicted RBP14.08□□□□□ -0.16
CHD3-206ENST00000452447 MCL1Q07820 350 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 TDGQ13569 410 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 MCM6Q14566 821 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 SEZ6Q53EL9 994 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 LARP4BQ92615 738 aaKnown RBP14.08□□□□□ -0.16
CHD3-206ENST00000452447 INTS4Q96HW7 963 aaKnown RBP14.08□□□□□ -0.16
CHD3-206ENST00000452447 BLOC1S4Q9NUP1 217 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 IGSF9Q9P2J2 1179 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 MTRRQ9UBK8 725 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 CLIC4Q9Y696 253 aa14.08□□□□□ -0.16
CHD3-206ENST00000452447 I3L4J1 428 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 HNRNPDLO14979 420 aaKnown RBP14.07□□□□□ -0.16
CHD3-206ENST00000452447 ADAM12O43184 909 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 TRAK2O60296 914 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 PDGFBP01127 241 aaPredicted RBP14.07□□□□□ -0.16
CHD3-206ENST00000452447 C8AP07357 584 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 CLTAP09496 248 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 HNRNPA1P09651 372 aaKnown RBP eCLIP14.07□□□□□ -0.16
CHD3-206ENST00000452447 IGFBP6P24592 240 aaPredicted RBP14.07□□□□□ -0.16
CHD3-206ENST00000452447 MARCKSP29966 332 aaPredicted RBP14.07□□□□□ -0.16
CHD3-206ENST00000452447 AVPR2P30518 371 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 DDIT3P35638 169 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 BRCC3P46736 316 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 NHLH1Q02575 133 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 RAB33AQ14088 237 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 IER5LQ5T953 404 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 GET4Q7L5D6 327 aaPredicted RBP14.07□□□□□ -0.16
CHD3-206ENST00000452447 C3orf58Q8NDZ4 430 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 CCSER1Q9C0I3 900 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 MFSD1Q9H3U5 465 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 CCDC39Q9UFE4 941 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 TBX20Q9UMR3 447 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 POLIQ9UNA4 740 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 BACE2Q9Y5Z0 518 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 CDY1Q9Y6F8 540 aa14.07□□□□□ -0.16
CHD3-206ENST00000452447 KMT2EQ8IZD2 1858 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 N4BP1O75113 896 aaKnown RBP14.06□□□□□ -0.16
CHD3-206ENST00000452447 XYLBO75191 536 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 ABCD1P33897 745 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 TXLNAP40222 546 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 ZNF131P52739 623 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 CEBPZQ03701 1054 aaKnown RBP14.06□□□□□ -0.16
CHD3-206ENST00000452447 KYAT1Q16773 422 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 UVSSAQ2YD98 709 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 SLC10A6Q3KNW5 377 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 SPECC1Q5M775 1068 aa14.06□□□□□ -0.16
CHD3-206ENST00000452447 AXDND1Q5T1B0 1012 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms