RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 ENPP3O14638 875 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 TNNC2P02585 160 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 C4BPAP04003 597 aaKnown RBP21.11■□□□□ 0.97
SGCE-207ENST00000447873 CSF2RAP15509 400 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 KCNMA1Q12791 1236 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 ZACNQ401N2 412 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 CNKSR3Q6P9H4 555 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 C15orf39Q6ZRI6 1047 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 SPC24Q8NBT2 197 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 CACTINQ8WUQ7 758 aaKnown RBP21.11■□□□□ 0.97
SGCE-207ENST00000447873 MTMR12Q9C0I1 747 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 UBN1Q9NPG3 1134 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 CNTN3Q9P232 1028 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 SIK3Q9Y2K2 1263 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 GIT1Q9Y2X7 761 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 PDCD11Q14690 1871 aaKnown RBP21.11■□□□□ 0.97
SGCE-207ENST00000447873 ITIH6Q6UXX5 1313 aa21.11■□□□□ 0.97
SGCE-207ENST00000447873 PHACTR2O75167 634 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 EOMESO95936 686 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 ATF7P17544 494 aaPredicted RBP21.1■□□□□ 0.97
SGCE-207ENST00000447873 KLK7P49862 253 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 FAM189BP81408 668 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 CCDC173Q0VFZ6 552 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 IKBKEQ14164 716 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 TCTN1Q2MV58 587 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 TDRD10Q5VZ19 366 aaKnown RBP21.1■□□□□ 0.97
SGCE-207ENST00000447873 RPUSD2Q8IZ73 545 aaKnown RBP21.1■□□□□ 0.97
SGCE-207ENST00000447873 FBXL13Q8NEE6 735 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 PDLIM2Q96JY6 352 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 TSPAN18Q96SJ8 248 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 CXCL16Q9H2A7 254 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 DERAQ9Y315 318 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.1■□□□□ 0.97
SGCE-207ENST00000447873 MICAL3Q7RTP6 2002 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 EVI5O60447 810 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 SLC9A1P19634 815 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 XKR4Q5GH76 650 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 AGMOQ6ZNB7 445 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 TRAPPC11Q7Z392 1133 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 ZNF598Q86UK7 904 aaKnown RBP21.1■□□□□ 0.97
SGCE-207ENST00000447873 TAS1R2Q8TE23 839 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 ZFP42Q96MM3 310 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 ZMAT2Q96NC0 199 aaKnown RBP21.1■□□□□ 0.97
SGCE-207ENST00000447873 LSM14BQ9BX40 385 aaKnown RBP21.1■□□□□ 0.97
SGCE-207ENST00000447873 RSAD1Q9HA92 442 aa21.1■□□□□ 0.97
SGCE-207ENST00000447873 FAM207AQ9NSI2 230 aaPredicted RBP21.1■□□□□ 0.97
SGCE-207ENST00000447873 SMIM28A0A1B0GU29 152 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 KCNE1P15382 129 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 TRIM21P19474 475 aaKnown RBP21.09■□□□□ 0.97
SGCE-207ENST00000447873 PON1P27169 355 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 MLH1P40692 756 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 EPC2Q52LR7 807 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 GLRA4Q5JXX5 417 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 EHBP1Q8NDI1 1231 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 RPS6KC1Q96S38 1066 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 GAD1Q99259 594 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 COQ4Q9Y3A0 265 aa21.09■□□□□ 0.97
SGCE-207ENST00000447873 ARL5CA6NH57 179 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 GOLGA6L6A8MZA4 724 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 PFKMP08237 780 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 TRIM65Q6PJ69 517 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 TNS4Q8IZW8 715 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 NEK11Q8NG66 645 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 VWCEQ96DN2 955 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 NUP58Q9BVL2 599 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 INTS2Q9H0H0 1204 aaKnown RBP21.08■□□□□ 0.97
SGCE-207ENST00000447873 ELAC1Q9H777 363 aaKnown RBP21.08■□□□□ 0.97
SGCE-207ENST00000447873 RNF19AQ9NV58 838 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 RAB20Q9NX57 234 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 TMEM161AQ9NX61 479 aa21.08■□□□□ 0.97
SGCE-207ENST00000447873 XPOTO43592 962 aaKnown RBP21.07■□□□□ 0.96
SGCE-207ENST00000447873 HLA-DRAP01903 254 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 PIK3CAP42336 1068 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 TRPC3Q13507 836 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 NCOA4Q13772 614 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 PPFIBP1Q86W92 1011 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 DPF3Q92784 378 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 PLCB1Q9NQ66 1216 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 RNF216Q9NWF9 866 aaPredicted RBP21.07■□□□□ 0.96
SGCE-207ENST00000447873 DPP3Q9NY33 737 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 IMPACTQ9P2X3 320 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 UBQLN1Q9UMX0 589 aaKnown RBP21.07■□□□□ 0.96
SGCE-207ENST00000447873 PCDHB7Q9Y5E2 793 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 TTC3P53804 2025 aa21.07■□□□□ 0.96
SGCE-207ENST00000447873 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.06■□□□□ 0.96
SGCE-207ENST00000447873 VNN1O95497 513 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 KRT19P08727 400 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 TPM1P09493 284 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 ACTN1P12814 892 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 TRIM14Q14142 442 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 ZBTB6Q15916 424 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 BEST2Q8NFU1 509 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 LMO3Q8TAP4 145 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 SEMA4DQ92854 862 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 BADQ92934 168 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 PPP1R9BQ96SB3 815 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 IL23AQ9NPF7 189 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 PCDH10Q9P2E7 1040 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 LRFN2Q9ULH4 789 aa21.06■□□□□ 0.96
SGCE-207ENST00000447873 R3HCC1Q9Y3T6 440 aaKnown RBP21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms