RNA–Protein interactions for RNA: ENST00000422252.1

SMDT1-202, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 2

Gene SMDT1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-202ENST00000422252 KCNE1P15382 129 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 PLCG1P19174 1290 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 FGFR3P22607 806 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 SOX4Q06945 474 aaPredicted RBP27.91■■■□□ 2.06
SMDT1-202ENST00000422252 DHX8Q14562 1220 aaKnown RBP27.91■■■□□ 2.06
SMDT1-202ENST00000422252 NOLC1Q14978 699 aaKnown RBP eCLIP27.91■■■□□ 2.06
SMDT1-202ENST00000422252 CD300LGQ6UXG3 332 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 ZPBP2Q6X784 338 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 DDX27Q96GQ7 796 aaKnown RBP27.91■■■□□ 2.06
SMDT1-202ENST00000422252 ZMAT2Q96NC0 199 aaKnown RBP27.91■■■□□ 2.06
SMDT1-202ENST00000422252 PRKD2Q9BZL6 878 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 PIDD1Q9HB75 910 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 CNTN3Q9P232 1028 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 FBXW11Q9UKB1 542 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 ZNF318Q5VUA4 2279 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 MYO10Q9HD67 2058 aa27.91■■■□□ 2.06
SMDT1-202ENST00000422252 TRAPPC3O43617 180 aa27.9■■■□□ 2.06
SMDT1-202ENST00000422252 ZMYND10O75800 440 aa27.9■■■□□ 2.06
SMDT1-202ENST00000422252 C3orf58Q8NDZ4 430 aa27.9■■■□□ 2.06
SMDT1-202ENST00000422252 RAD54LQ92698 747 aa27.9■■■□□ 2.06
SMDT1-202ENST00000422252 SMOC2Q9H3U7 446 aa27.9■■■□□ 2.06
SMDT1-202ENST00000422252 CLIC4Q9Y696 253 aa27.9■■■□□ 2.06
SMDT1-202ENST00000422252 VWA8A3KMH1 1905 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 CLDN3O15551 220 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 SYT1P21579 422 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 MCL1Q07820 350 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 MCM6Q14566 821 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 HAUS6Q7Z4H7 955 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 KCNN1Q92952 543 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 BICD1Q96G01 975 aa27.89■■■□□ 2.06
SMDT1-202ENST00000422252 INTS4Q96HW7 963 aaKnown RBP27.89■■■□□ 2.06
SMDT1-202ENST00000422252 PODXLO00592 558 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 MEFVO15553 781 aaPredicted RBP27.88■■■□□ 2.05
SMDT1-202ENST00000422252 ADAM12O43184 909 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 N4BP1O75113 896 aaKnown RBP27.88■■■□□ 2.05
SMDT1-202ENST00000422252 FAM13AO94988 1023 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 TKTP29401 623 aaKnown RBP27.88■■■□□ 2.05
SMDT1-202ENST00000422252 MATR3P43243 847 aaKnown RBP eCLIP27.88■■■□□ 2.05
SMDT1-202ENST00000422252 ZNF131P52739 623 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 RESTQ13127 1097 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 PTPAQ15257 358 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 LIN9Q5TKA1 542 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 MYCT1Q8N699 235 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 CCSER1Q9C0I3 900 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 PARVGQ9HBI0 331 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 MTRRQ9UBK8 725 aa27.88■■■□□ 2.05
SMDT1-202ENST00000422252 KRT18P05783 430 aaKnown RBP27.87■■■□□ 2.05
SMDT1-202ENST00000422252 SCP2P22307 547 aa27.87■■■□□ 2.05
SMDT1-202ENST00000422252 GBP2P32456 591 aaPredicted RBP27.87■■■□□ 2.05
SMDT1-202ENST00000422252 BRCC3P46736 316 aa27.87■■■□□ 2.05
SMDT1-202ENST00000422252 SLC10A6Q3KNW5 377 aa27.87■■■□□ 2.05
SMDT1-202ENST00000422252 SEZ6Q53EL9 994 aa27.87■■■□□ 2.05
SMDT1-202ENST00000422252 LARP4BQ92615 738 aaKnown RBP27.87■■■□□ 2.05
SMDT1-202ENST00000422252 MUC6Q6W4X9 2439 aa27.87■■■□□ 2.05
SMDT1-202ENST00000422252 I3L4J1 428 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 K7ENM7 598 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 PDGFBP01127 241 aaPredicted RBP27.86■■■□□ 2.05
SMDT1-202ENST00000422252 RPL9P32969 192 aaKnown RBP27.86■■■□□ 2.05
SMDT1-202ENST00000422252 OR1D2P34982 312 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 RAB33AQ14088 237 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 ANKS3Q6ZW76 656 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 C18orf25Q96B23 403 aaPredicted RBP27.86■■■□□ 2.05
SMDT1-202ENST00000422252 HAPLN2Q9GZV7 340 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 KCNK12Q9HB15 430 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 BACE2Q9Y5Z0 518 aa27.86■■■□□ 2.05
SMDT1-202ENST00000422252 CITO14578 2027 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 C8AP07357 584 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 HNRNPA1P09651 372 aaKnown RBP eCLIP27.85■■■□□ 2.05
SMDT1-202ENST00000422252 MARCKSP29966 332 aaPredicted RBP27.85■■■□□ 2.05
SMDT1-202ENST00000422252 DDIT3P35638 169 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 TDGQ13569 410 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 SPECC1Q5M775 1068 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 PPM1LQ5SGD2 360 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 IER5LQ5T953 404 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 EPSTI1Q96J88 318 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 MYADMQ96S97 322 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 IGSF9Q9P2J2 1179 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 EPS15L1Q9UBC2 864 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 FBXO2Q9UK22 296 aaPredicted RBP27.85■■■□□ 2.05
SMDT1-202ENST00000422252 TBX20Q9UMR3 447 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 CDY1Q9Y6F8 540 aa27.85■■■□□ 2.05
SMDT1-202ENST00000422252 K7ELQ4 463 aaPredicted RBP27.84■■■□□ 2.05
SMDT1-202ENST00000422252 TRAK2O60296 914 aa27.84■■■□□ 2.05
SMDT1-202ENST00000422252 TBCAO75347 108 aaKnown RBP27.84■■■□□ 2.05
SMDT1-202ENST00000422252 CLTAP09496 248 aa27.84■■■□□ 2.05
SMDT1-202ENST00000422252 LIG4P49917 911 aa27.84■■■□□ 2.05
SMDT1-202ENST00000422252 VCPP55072 806 aaKnown RBP27.84■■■□□ 2.05
SMDT1-202ENST00000422252 FAM173BQ6P4H8 233 aa27.84■■■□□ 2.05
SMDT1-202ENST00000422252 PRRX2Q99811 253 aa27.84■■■□□ 2.05
SMDT1-202ENST00000422252 ZHX3Q9H4I2 956 aa27.84■■■□□ 2.05
SMDT1-202ENST00000422252 SRPRBQ9Y5M8 271 aaKnown RBP27.84■■■□□ 2.05
SMDT1-202ENST00000422252 WDFY4Q6ZS81 3184 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 HNRNPDLO14979 420 aaKnown RBP27.83■■■□□ 2.05
SMDT1-202ENST00000422252 PIGRP01833 764 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 CXCL8P10145 99 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 AVPR2P30518 371 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 HOXA9P31269 272 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 HOXD11P31277 338 aaPredicted RBP27.83■■■□□ 2.05
SMDT1-202ENST00000422252 NHLH1Q02575 133 aa27.83■■■□□ 2.05
SMDT1-202ENST00000422252 RSPO2Q6UXX9 243 aaPredicted RBP27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms