RNA–Protein interactions for RNA: ENST00000416636.2

CLK2P1-201, Transcript of CDC like kinase 2, pseudogene 1, humanhuman

BASIC

Gene CLK2P1, Length 1,294 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2P1-201ENST00000416636 TOPORSQ9NS56 1045 aaPredicted RBP13.64□□□□□ -0.23
CLK2P1-201ENST00000416636 KCND2Q9NZV8 630 aa13.64□□□□□ -0.23
CLK2P1-201ENST00000416636 NPHP3-ACAD11A0A0J9YXS1 232 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 SLC26A4O43511 780 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 MAPTP10636 758 aaKnown RBP13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 KCNE1P15382 129 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 TCF15Q12870 199 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 TDGQ13569 410 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 PDXDC1Q6P996 788 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 BRAPQ7Z569 592 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 CDK5RAP3Q96JB5 506 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 SNX27Q96L92 541 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 AK8Q96MA6 479 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 ACAP3Q96P50 834 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 TCHPQ9BT92 498 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 CNTN3Q9P232 1028 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 IGSF9Q9P2J2 1179 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 EPS15L1Q9UBC2 864 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 MTRRQ9UBK8 725 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 KCNG1Q9UIX4 513 aa13.63□□□□□ -0.23
CLK2P1-201ENST00000416636 VPS13AQ96RL7 3174 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 TOM1L1O75674 476 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 TKTP29401 623 aaKnown RBP13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 GBP2P32456 591 aaPredicted RBP13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 BRCC3P46736 316 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 SMTNP53814 917 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 PTPN5P54829 565 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 NCKAP1LP55160 1127 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 GRIN1Q05586 938 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 STRN3Q13033 797 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 RAB33AQ14088 237 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 RSPO2Q6UXX9 243 aaPredicted RBP13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 ALYREFQ86V81 257 aaKnown RBP13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 KCNN1Q92952 543 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 DDX27Q96GQ7 796 aaKnown RBP13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 HAPLN2Q9GZV7 340 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 PIDD1Q9HB75 910 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 BLOC1S4Q9NUP1 217 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 SLC38A7Q9NVC3 462 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 LARSQ9P2J5 1176 aaKnown RBP13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 DUSP12Q9UNI6 340 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 USP34Q70CQ2 3546 aa13.62□□□□□ -0.23
CLK2P1-201ENST00000416636 I3L4J1 428 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 PODXLO00592 558 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 TRAPPC3O43617 180 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 BMP15O95972 392 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 HNRNPA1P09651 372 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 HOXA9P31269 272 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 OR1D2P34982 312 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 LONP1P36776 959 aaKnown RBP13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 UBA7P41226 1012 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 MRE11P49959 708 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 SF3A1Q15459 793 aaKnown RBP13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 SLC10A6Q3KNW5 377 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 ZPBP2Q6X784 338 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 RSAD2Q8WXG1 361 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 CALML4Q96GE6 196 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 PHOX2BQ99453 314 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 REEP2Q9BRK0 252 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 ANKFY1Q9P2R3 1169 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 ODF2LQ9ULJ1 636 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 BACE2Q9Y5Z0 518 aa13.61□□□□□ -0.23
CLK2P1-201ENST00000416636 NARSO43776 548 aaKnown RBP13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 C8AP07357 584 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 HARSP12081 509 aaKnown RBP13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 LAMP2P13473 410 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 PLCG1P19174 1290 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 ZNF131P52739 623 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 NUBP1P53384 320 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 MCL1Q07820 350 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 KARSQ15046 597 aaKnown RBP13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 SEZ6Q53EL9 994 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 PPM1LQ5SGD2 360 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 AXDND1Q5T1B0 1012 aaPredicted RBP13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 LIN9Q5TKA1 542 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 ANKS3Q6ZW76 656 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 GET4Q7L5D6 327 aaPredicted RBP13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 HAUS6Q7Z4H7 955 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 GRASPQ7Z6J2 395 aaPredicted RBP13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 GPBP1Q86WP2 473 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 SLC44A3Q8N4M1 653 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 TMEM105Q8N8V8 129 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 NXPE3Q969Y0 559 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 C18orf25Q96B23 403 aaPredicted RBP13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 CDY1Q9Y6F8 540 aa13.6□□□□□ -0.23
CLK2P1-201ENST00000416636 VPS37CA5D8V6 355 aaPredicted RBP13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 ANHXE9PGG2 379 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 H0YCG3 227 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 CCL16O15467 120 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 CLDN3O15551 220 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 TBC1D4O60343 1298 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 POU2F2P09086 479 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 NPR3P17342 541 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 RPL9P32969 192 aaKnown RBP13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 NTHL1P78549 312 aa13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 DHX8Q14562 1220 aaKnown RBP13.59□□□□□ -0.23
CLK2P1-201ENST00000416636 MCM6Q14566 821 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms