RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 AKAP11Q9UKA4 1901 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 FAM170AA1A519 330 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ZNF263O14978 683 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 EYA4O95677 639 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 PABPC4LP0CB38 370 aaKnown RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 PRCPP42785 496 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 COG7P83436 770 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ARHGAP4P98171 946 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 CDR2Q01850 454 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ARL6IP4Q66PJ3 421 aaKnown RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 CROCCP3Q8IVE0 287 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 IQCF2Q8IXL9 164 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 VPS52Q8N1B4 723 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ANKRD35Q8N283 1001 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 DDX12PQ92771 950 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 CASP10Q92851 521 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 BHMTQ93088 406 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 DGCR14Q96DF8 476 aaKnown RBP8.32□□□□□ -1.08
SIK3-203ENST00000415541 ERP27Q96DN0 273 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.32□□□□□ -1.086e-7■□□□□ 9
SIK3-203ENST00000415541 DISC1Q9NRI5 854 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 GGA3Q9NZ52 723 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 NYAP2Q9P242 653 aa8.32□□□□□ -1.08
SIK3-203ENST00000415541 ARHGAP10A1A4S6 786 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 HTR3EA5X5Y0 456 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ETS2P15036 469 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 PTPN4P29074 926 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 STAT3P40763 770 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ACADVLP49748 655 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 HDAC4P56524 1084 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 STRN3Q13033 797 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 NAB2Q15742 525 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 CLUL1Q15846 466 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 CCDC153Q494R4 210 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 PDCD4Q53EL6 469 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 DCAF17Q5H9S7 520 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 MYCT1Q8N699 235 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ANKRD42Q8N9B4 389 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 CEP70Q8NHQ1 597 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 TTC8Q8TAM2 541 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 LARP4BQ92615 738 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 MTMR8Q96EF0 704 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 TGS1Q96RS0 853 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 EDEM3Q9BZQ6 932 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ROPN1BQ9BZX4 212 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 TTYH3Q9C0H2 523 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ROPN1Q9HAT0 212 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 HAO1Q9UJM8 370 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 TSC22D4Q9Y3Q8 395 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 MYH7BA7E2Y1 1941 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 MYH7P12883 1935 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 NDC80O14777 642 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 STRNO43815 780 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 CBFA2T3O75081 653 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ENTPD5O75356 428 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ZWINTO95229 277 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 PORP16435 677 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 POLGP54098 1239 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 HMGCS2P54868 508 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ARPC4P59998 168 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 SPIDRQ14159 915 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 PPP1R21Q6ZMI0 780 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 RIBC1Q8N443 379 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 SCFD2Q8WU76 684 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 SREK1Q8WXA9 508 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 NMD3Q96D46 503 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 ARHGAP20Q9P2F6 1191 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 COL1A1P02452 1464 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 MYO5AQ9Y4I1 1855 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 ITGB4P16144 1822 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 YDJCA8MPS7 323 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 SPECC1L-ADORA2AF8WAN1 911 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 WNT10BO00744 389 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 GCNT3O95395 438 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 CPA3P15088 417 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 TMED10P49755 219 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 RAB15P59190 212 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 TGFB2P61812 414 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 IL9RQ01113 521 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 MTMR2Q13614 643 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ZNF449Q6P9G9 518 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 EEPD1Q7L9B9 569 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 DAAM2Q86T65 1068 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 ADSSL1Q8N142 457 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 RDH13Q8NBN7 331 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 AGBL1Q96MI9 1066 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 TRIM31Q9BZY9 425 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 NT5C3AQ9H0P0 336 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 DDX47Q9H0S4 455 aaKnown RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 DENND2DQ9H6A0 471 aaPredicted RBP8.31□□□□□ -1.08
SIK3-203ENST00000415541 UBAP1Q9NZ09 502 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 HACL1Q9UJ83 578 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 SYNPO2Q9UMS6 1093 aa8.31□□□□□ -1.08
SIK3-203ENST00000415541 NUP98P52948 1817 aa8.3□□□□□ -1.08
SIK3-203ENST00000415541 LAD1O00515 517 aa8.3□□□□□ -1.08
SIK3-203ENST00000415541 PLEKP08567 350 aaPredicted RBP8.3□□□□□ -1.08
SIK3-203ENST00000415541 TARSP26639 723 aaKnown RBP8.3□□□□□ -1.08
SIK3-203ENST00000415541 ECHS1P30084 290 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms