RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 UROC1Q96N76 676 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 PANK2Q9BZ23 570 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 ZHX3Q9H4I2 956 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 CNTN3Q9P232 1028 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 STK17AQ9UEE5 414 aa19.36■□□□□ 0.69
LSM5-204ENST00000409909 MYH15Q9Y2K3 1946 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 TECTAO75443 2155 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 C2CD4DB7Z1M9 353 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 K7ENM7 598 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 TGM5O43548 720 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 TBCAO75347 108 aaKnown RBP19.35■□□□□ 0.69
LSM5-204ENST00000409909 DYMQ7RTS9 669 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 PIK3R5Q8WYR1 880 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 BICD1Q96G01 975 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 CLSTN3Q9BQT9 956 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 C2orf16Q68DN1 1984 aa19.35■□□□□ 0.69
LSM5-204ENST00000409909 MTCL1Q9Y4B5 1905 aaKnown RBP19.35■□□□□ 0.69
LSM5-204ENST00000409909 MYMKA6NI61 221 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 SPDYE4A6NLX3 237 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 I3L4J1 428 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 ADAM12O43184 909 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 FAM189A1O60320 539 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 RFPL2O75678 378 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 C1RP00736 705 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 PIGRP01833 764 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 SCP2P22307 547 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 FGFR3P22607 806 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 GTF2BQ00403 316 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 ELAVL2Q12926 359 aaKnown RBP19.34■□□□□ 0.69
LSM5-204ENST00000409909 STK38Q15208 465 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 ZC2HC1CQ53FD0 456 aaPredicted RBP19.34■□□□□ 0.69
LSM5-204ENST00000409909 SLC39A4Q6P5W5 647 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 CMASQ8NFW8 434 aaPredicted RBP19.34■□□□□ 0.69
LSM5-204ENST00000409909 DDX12PQ92771 950 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 EDAQ92838 391 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 DNAJC19Q96DA6 116 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 SLC38A7Q9NVC3 462 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 NR2E1Q9Y466 385 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 WDFY4Q6ZS81 3184 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 MYO10Q9HD67 2058 aa19.34■□□□□ 0.69
LSM5-204ENST00000409909 CCDC195A0A1B0GUA6 201 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 PRR33A8MZF0 331 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 HNRNPDLO14979 420 aaKnown RBP19.33■□□□□ 0.68
LSM5-204ENST00000409909 ZSCAN22P10073 491 aaPredicted RBP19.33■□□□□ 0.68
LSM5-204ENST00000409909 CXCL8P10145 99 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 TXLNAP40222 546 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 TNFSF9P41273 254 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 MATR3P43243 847 aaKnown RBP eCLIP19.33■□□□□ 0.68
LSM5-204ENST00000409909 BRCC3P46736 316 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 LIG4P49917 911 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 CREMQ03060 361 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 PKP1Q13835 747 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 PSMD5Q16401 504 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 ZBTB41Q5SVQ8 909 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.33■□□□□ 0.68
LSM5-204ENST00000409909 C15orf39Q6ZRI6 1047 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 SV2BQ7L1I2 683 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 TMEM130Q8N3G9 435 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 SPRYD3Q8NCJ5 442 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 HDAC7Q8WUI4 952 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 ZNF707Q96C28 371 aaPredicted RBP19.33■□□□□ 0.68
LSM5-204ENST00000409909 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.68
LSM5-204ENST00000409909 PDCD11Q14690 1871 aaKnown RBP19.33■□□□□ 0.68
LSM5-204ENST00000409909 DENND4AQ7Z401 1863 aa19.33■□□□□ 0.68
LSM5-204ENST00000409909 A0A0B4J269 797 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 TTC26A0AVF1 554 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 ANKRD63C9JTQ0 380 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 PODXLO00592 558 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 SPTLC2O15270 562 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 PAPLNO95428 1278 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 HSP90AA1P07900 732 aaKnown RBP19.32■□□□□ 0.68
LSM5-204ENST00000409909 CLTAP09496 248 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 TKTP29401 623 aaKnown RBP19.32■□□□□ 0.68
LSM5-204ENST00000409909 ZXDAP98168 799 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 RSPO2Q6UXX9 243 aaPredicted RBP19.32■□□□□ 0.68
LSM5-204ENST00000409909 CCDC73Q6ZRK6 1079 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 ZNF720Q7Z2F6 126 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 SFR1Q86XK3 245 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 MAP4K3Q8IVH8 894 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 ZNF396Q96N95 335 aaPredicted RBP19.32■□□□□ 0.68
LSM5-204ENST00000409909 IKZF4Q9H2S9 585 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 ST6GALNAC4Q9H4F1 302 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 PLEKHA4Q9H4M7 779 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 PLEKHA5Q9HAU0 1116 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 DPP7Q9UHL4 492 aa19.32■□□□□ 0.68
LSM5-204ENST00000409909 TISP43B9A030 160 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 PPP6R2O75170 966 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 RPL9P32969 192 aaKnown RBP19.31■□□□□ 0.68
LSM5-204ENST00000409909 STAT6P42226 847 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 SPAG1Q07617 926 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 ENOX2Q16206 610 aaKnown RBP19.31■□□□□ 0.68
LSM5-204ENST00000409909 PTPN21Q16825 1174 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 FOXD4L6Q3SYB3 417 aaPredicted RBP19.31■□□□□ 0.68
LSM5-204ENST00000409909 FOXD4L3Q6VB84 417 aaPredicted RBP19.31■□□□□ 0.68
LSM5-204ENST00000409909 PDILTQ8N807 584 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 KREMEN2Q8NCW0 462 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 STRA6Q9BX79 667 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 TUBGCP4Q9UGJ1 667 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 USTQ9Y2C2 406 aa19.31■□□□□ 0.68
LSM5-204ENST00000409909 LACTBL1A8MY62 500 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms