RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 STYXL1Q9Y6J8 313 aa19.56■□□□□ 0.72
PDLIM2-206ENST00000409141 TTC28Q96AY4 2481 aa19.56■□□□□ 0.72
PDLIM2-206ENST00000409141 SF3B1O75533 1304 aaKnown RBP eCLIP19.56■□□□□ 0.72
PDLIM2-206ENST00000409141 CUL9Q8IWT3 2517 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 GRXCR2A6NFK2 248 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 LILRB3O75022 631 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 CASP1P29466 404 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 CLCNKBP51801 687 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 SOX4Q06945 474 aaPredicted RBP19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 KCNC3Q14003 757 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 POSTNQ15063 836 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 ZBTB41Q5SVQ8 909 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 KIAA0319Q5VV43 1072 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 TMEM184AQ6ZMB5 413 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 STXBP4Q6ZWJ1 553 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 HPS3Q969F9 1004 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 DDX27Q96GQ7 796 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 MSLNLQ96KJ4 702 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 KLHL5Q96PQ7 755 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 FGFBP2Q9BYJ0 223 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 RPF1Q9H9Y2 349 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 USP25Q9UHP3 1055 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 AGO2Q9UKV8 859 aaKnown RBP19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 FAM50BQ9Y247 325 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 HPSEQ9Y251 543 aa19.55■□□□□ 0.72
PDLIM2-206ENST00000409141 A0A1W2PQ27 194 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 A0A1W2PQ64 194 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 A0A1W2PQD8 194 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 ACTN4O43707 911 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 FAM189A1O60320 539 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 B3GAT3O94766 335 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 PRPF6O94906 941 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 KLRC2P26717 231 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 SYKP43405 635 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 DSG1Q02413 1049 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 CUL4BQ13620 913 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 ENOX2Q16206 610 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 UPP1Q16831 310 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 UNC13DQ70J99 1090 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 GRAMD1CQ8IYS0 662 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 POMGNT1Q8WZA1 660 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 C18orf25Q96B23 403 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 FAM212AQ96EL1 285 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 B3GALT6Q96L58 329 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 UHRF1Q96T88 793 aaPredicted RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 TMEM206Q9H813 350 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 CHST7Q9NS84 486 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 HCFC2Q9Y5Z7 792 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 TRIP11Q15643 1979 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 TTC26A0AVF1 554 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 LACTBL1A8MY62 500 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 CNPP09543 421 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 IL9P15248 144 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 ACOT2P49753 483 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 NDUFA8P51970 172 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 PPP2R3AQ06190 1150 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 SPAG1Q07617 926 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 ELAVL2Q12926 359 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 FAM171A1Q5VUB5 890 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 PPFIBP1Q86W92 1011 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 CEP57Q86XR8 500 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 FSIP1Q8NA03 581 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 CASP10Q92851 521 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 PAGE5Q96GU1 130 aa19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 CPSF3Q9UKF6 684 aaKnown RBP19.54■□□□□ 0.72
PDLIM2-206ENST00000409141 TCF20Q9UGU0 1960 aaKnown RBP19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 XIRP2A4UGR9 3374 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 TCHHQ07283 1943 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 FAM237AA0A1B0GTK4 181 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 PVALEFA0A1B0GWK0 134 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 TMEM189-UBE2V1I3L0A0 370 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 PODXLO00592 558 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 ADSSP30520 456 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 FAM26FQ5R3K3 315 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 ANKRD54Q6NXT1 300 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 GLIS3Q8NEA6 775 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 RIN2Q8WYP3 895 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 KIF12Q96FN5 646 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 NECAB3Q96P71 396 aaPredicted RBP19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 TTPALQ9BTX7 342 aa19.53■□□□□ 0.72
PDLIM2-206ENST00000409141 GOLGA6L4A6NEF3 574 aa19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 MBTPS2O43462 519 aa19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 TRAPPC3O43617 180 aa19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 IGFBP6P24592 240 aaPredicted RBP19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 RPL9P32969 192 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 SMAD4Q13485 552 aaKnown RBP19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 CD302Q8IX05 232 aa19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 SLC22A17Q8WUG5 538 aa19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 RXFP1Q9HBX9 757 aa19.52■□□□□ 0.72
PDLIM2-206ENST00000409141 CITO14578 2027 aa19.52■□□□□ 0.71
PDLIM2-206ENST00000409141 TEX28O15482 410 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 ADH1AP07327 375 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 ADRB2P07550 413 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 EPCAMP16422 314 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 HOXB8P17481 243 aaPredicted RBP19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 RTP2Q5QGT7 225 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 CD300LGQ6UXG3 332 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 GPR65Q8IYL9 337 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 SMRP1Q8NCR6 262 aa19.51■□□□□ 0.71
PDLIM2-206ENST00000409141 TSPAN18Q96SJ8 248 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms