RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 GLIS2Q9BZE0 524 aaPredicted RBP11.46□□□□□ -0.57
CLIP4-204ENST00000404424 CD248Q9HCU0 757 aa11.46□□□□□ -0.57
CLIP4-204ENST00000404424 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLIP4-204ENST00000404424 PSME4Q14997 1843 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 SORBS3O60504 671 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 ATP2C2O75185 946 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 LONRF1Q17RB8 773 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 PREPLQ4J6C6 727 aaPredicted RBP11.46□□□□□ -0.58
CLIP4-204ENST00000404424 GPD1LQ8N335 351 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 POMGNT1Q8WZA1 660 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 DHX38Q92620 1227 aaKnown RBP11.46□□□□□ -0.58
CLIP4-204ENST00000404424 POP1Q99575 1024 aaKnown RBP11.46□□□□□ -0.58
CLIP4-204ENST00000404424 DCLK3Q9C098 648 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.46□□□□□ -0.58
CLIP4-204ENST00000404424 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.46□□□□□ -0.58
CLIP4-204ENST00000404424 PCDHB2Q9Y5E7 798 aa11.46□□□□□ -0.58
CLIP4-204ENST00000404424 TMEM150BA6NC51 233 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 DKC1O60832 514 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 ACSL3O95573 720 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 OAS1P00973 400 aaKnown RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 KRT5P13647 590 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 MAP2K2P36507 400 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 BRDTQ58F21 947 aaPredicted RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 CEP128Q6ZU80 1094 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 GBP7Q8N8V2 638 aaPredicted RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 MTMR14Q8NCE2 650 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 TAAR1Q96RJ0 339 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 MYCBPQ99417 103 aaPredicted RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 SENP7Q9BQF6 1050 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 DDX23Q9BUQ8 820 aaKnown RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 TMEM39BQ9GZU3 492 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 VEZTQ9HBM0 779 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 SLC38A10Q9HBR0 1119 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 CHST7Q9NS84 486 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 TMEM120BA0PK00 339 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 ATF2P15336 505 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 EIF2AK2P19525 551 aaKnown RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 CHRNA5P30532 468 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 CHKAP35790 457 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 IFNAR2P48551 515 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 ITGA8P53708 1063 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 RTP1P59025 263 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 ELF3P78545 371 aaPredicted RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 MKRN3Q13064 507 aaKnown RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 PLA2G4FQ68DD2 849 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 XRRA1Q6P2D8 792 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 SLC39A4Q6P5W5 647 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 RELL1Q8IUW5 271 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 CCDC63Q8NA47 563 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 DDX27Q96GQ7 796 aaKnown RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 ZNF341Q9BYN7 854 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 KIAA1586Q9HCI6 787 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 C1orf112Q9NSG2 853 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 TPX2Q9ULW0 747 aaKnown RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 USP15Q9Y4E8 981 aaPredicted RBP11.45□□□□□ -0.58
CLIP4-204ENST00000404424 MROH7Q68CQ1 1323 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 MYPNQ86TC9 1320 aa11.45□□□□□ -0.58
CLIP4-204ENST00000404424 H0YCG3 227 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 MAFGO15525 162 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 PSTPIP1O43586 416 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 SUN1O94901 812 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 CCNE2O96020 404 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 CYP1A1P04798 512 aaPredicted RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 RPS6P62753 249 aaKnown RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 SNX1Q13596 522 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 CCNG2Q16589 344 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 CCDC38Q502W7 563 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 PPP1R2P3Q6NXS1 205 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 VSTM1Q6UX27 236 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 C15orf39Q6ZRI6 1047 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 ANO5Q75V66 913 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 CPXCR1Q8N123 301 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 CCDC89Q8N998 374 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 SCLT1Q96NL6 688 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 PDCD2LQ9BRP1 358 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 MOV10L1Q9BXT6 1211 aaKnown RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 FOXP3Q9BZS1 431 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 TOPORSQ9NS56 1045 aaPredicted RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 KCNG1Q9UIX4 513 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 ANAPC5Q9UJX4 755 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 PCDHA10Q9Y5I2 948 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 ACTL7BQ9Y614 415 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 RGPD3A6NKT7 1758 aaPredicted RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 RGPD4Q7Z3J3 1758 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 O00370 1275 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 THAP12O43422 761 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 ATP9AO75110 1047 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 PROSCO94903 275 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 MYCLP12524 364 aaPredicted RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 ADCY8P40145 1251 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 NSFP46459 744 aaKnown RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 KLF1Q13351 362 aaPredicted RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 RIPK1Q13546 671 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 NEDD9Q14511 834 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 WDR44Q5JSH3 913 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 LIN9Q5TKA1 542 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 CHADLQ6NUI6 762 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 HIBCHQ6NVY1 386 aaPredicted RBP11.44□□□□□ -0.58
CLIP4-204ENST00000404424 TRIM72Q6ZMU5 477 aa11.44□□□□□ -0.58
CLIP4-204ENST00000404424 FAM228AQ86W67 206 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms