RNA–Protein interactions for RNA: ENST00000398073.6

CTDSP2-201, Transcript of CTD small phosphatase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP2, Length 4,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-201ENST00000398073 FBXO40Q9UH90 709 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 JCADQ9P266 1359 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 RSPH10B2B2RC85 870 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 M0QYV0 167 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 CAND2O75155 1236 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 PPFIA2O75334 1257 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 RSPH10BP0C881 870 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 EPHB1P54762 984 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 COPS2P61201 443 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 SKOR1P84550 965 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 ZNF662Q6ZS27 426 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 TTC39CQ8N584 583 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 MCUQ8NE86 351 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 SLC13A1Q9BZW2 595 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 ZNF408Q9H9D4 720 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 A0A0U1RQJ8 604 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 ZSCAN5CA6NGD5 496 aaPredicted RBP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 PGM1P36871 562 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 CDH6P55285 790 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 EIF3EP60228 445 aaKnown RBP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 RNF168Q8IYW5 571 aaPredicted RBP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 KIF2BQ8N4N8 673 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 TTLL6Q8N841 843 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 TSSK1BQ9BXA7 367 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 GCOM2Q9BZD3 368 aaPredicted RBP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 DRC3Q9H069 523 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 RANBP17Q9H2T7 1088 aaKnown RBP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 CD248Q9HCU0 757 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 KLHL11Q9NVR0 708 aa17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 MAGED2Q9UNF1 606 aaPredicted RBP17.32■□□□□ 0.36
CTDSP2-201ENST00000398073 ASAP2O43150 1006 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 FAM102AQ5T9C2 384 aaPredicted RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 OR6B3Q8NGW1 331 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 SPATA20Q8TB22 786 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 PIP4K2CQ8TBX8 421 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 C18orf8Q96DM3 657 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 PNMA5Q96PV4 448 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 IL17RBQ9NRM6 502 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 C21orf2O43822 256 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 CDKL3Q8IVW4 592 aaPredicted RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 VPS11Q9H270 941 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 NPHS2Q9NP85 383 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 F8VZ95 297 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 PIGHQ14442 188 aaPredicted RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 RBBP8NLQ8NC74 664 aaPredicted RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 MXRA8Q9BRK3 442 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 HOXC10Q9NYD6 342 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 CCDC195A0A1B0GUA6 201 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 GOLGA8RI6L899 631 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 CCNA1P78396 465 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 MKRN4PQ13434 485 aaPredicted RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 LRRC23Q53EV4 343 aaPredicted RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 HEATR6Q6AI08 1181 aaKnown RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 LONP2Q86WA8 852 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 RNF169Q8NCN4 708 aa17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 UPF3AQ9H1J1 476 aaKnown RBP17.31■□□□□ 0.36
CTDSP2-201ENST00000398073 SPATA31A1Q5TZJ5 1347 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 GZMAP12544 262 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 PTENP60484 403 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 FOXR1Q6PIV2 292 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 TMEM139Q8IV31 216 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 ALG13Q9NP73 1137 aaKnown RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 OSGEPQ9NPF4 335 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 GDF3Q9NR23 364 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 WDR35Q9P2L0 1181 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 MUTP22033 750 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 XKR3Q5GH77 459 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 EPS8L3Q8TE67 593 aaKnown RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 KDM4CQ9H3R0 1056 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 KLHL8Q9P2G9 620 aaPredicted RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 SMAPO00193 183 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 PDE2AO00408 941 aaPredicted RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 CA8P35219 290 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 EFNA5P52803 228 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 ERVK-9P63128 1117 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 PDE1CQ14123 709 aaPredicted RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 ARHGAP18Q8N392 663 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 RTFDC1Q9BY42 306 aaPredicted RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 SUDS3Q9H7L9 328 aaPredicted RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 JPH1Q9HDC5 661 aaPredicted RBP17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 SIK3Q9Y2K2 1263 aa17.3■□□□□ 0.36
CTDSP2-201ENST00000398073 SSTR3P32745 418 aaPredicted RBP17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 SREBF1P36956 1147 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 KLC1Q07866 573 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 SPP2Q13103 211 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 ACAD10Q6JQN1 1059 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 EIF1ADQ8N9N8 165 aaKnown RBP17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 PDZD8Q8NEN9 1154 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 CHORDC1Q9UHD1 332 aaPredicted RBP17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 TRIM33Q9UPN9 1127 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 TRAF3IP3Q9Y228 551 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 SH3BP5O60239 455 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 ARL13BQ3SXY8 428 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 ACAD11Q709F0 780 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 TRIM56Q9BRZ2 755 aaKnown RBP17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 UBN1Q9NPG3 1134 aa17.29■□□□□ 0.36
CTDSP2-201ENST00000398073 BLOC1S4Q9NUP1 217 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms