RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 EFR3AQ14156 821 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 POTEAQ6S8J7 498 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 RBBP8NLQ8NC74 664 aaPredicted RBP11.34□□□□□ -0.59
CLCN4-202ENST00000380833 EPC1Q9H2F5 836 aa11.34□□□□□ -0.59
CLCN4-202ENST00000380833 NNMTP40261 264 aa11.33□□□□□ -0.59
CLCN4-202ENST00000380833 TRIM71Q2Q1W2 868 aaKnown RBP11.33□□□□□ -0.59
CLCN4-202ENST00000380833 SNRNP48Q6IEG0 339 aaKnown RBP11.33□□□□□ -0.59
CLCN4-202ENST00000380833 HEMGNQ9BXL5 484 aa11.33□□□□□ -0.59
CLCN4-202ENST00000380833 SERPINB13Q9UIV8 391 aa11.33□□□□□ -0.59
CLCN4-202ENST00000380833 DCTN4Q9UJW0 460 aa11.33□□□□□ -0.59
CLCN4-202ENST00000380833 E5RI56 91 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 SNAP23O00161 211 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TBC1D4O60343 1298 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TMPRSS15P98073 1019 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 RNF19BQ6ZMZ0 732 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 SRRM1Q8IYB3 904 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 GGT7Q9UJ14 662 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TMED5Q9Y3A6 229 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 KDM6BO15054 1643 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 A0A1W2PRG6 482 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 EVPLLA8MZ36 301 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 PSMA2P25787 234 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 PSMC2P35998 433 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 CYP4A22Q5TCH4 519 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 SHQ1Q6PI26 577 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TTC33Q6PID6 262 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 MICALL2Q8IY33 904 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 MMP19Q99542 508 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 DCLRE1BQ9H816 532 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 MRPL39Q9NYK5 338 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 MID2Q9UJV3 735 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 L3MBTL1Q9Y468 752 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 ZMYM6O95789 1325 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 RBM47A0AV96 593 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 SUPT3HB4E1H0 165 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 RASA4BC9J798 803 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 PJA2O43164 708 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 RASA4O43374 803 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 LCP1P13796 627 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 CYGBQ8WWM9 190 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 NARS2Q96I59 477 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 GTSE1Q9NYZ3 720 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 ADGRA3Q8IWK6 1321 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TRIM64A6NGJ6 449 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 FAM47DPA6NHR8 397 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TRIM64BA6NI03 449 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TCP11X1B4DZS4 312 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 CDC40O60508 579 aaKnown RBP eCLIP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 KRT37O76014 449 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 LARP4BQ92615 738 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 CIDEBQ9UHD4 219 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 H0YCG3 227 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 POLR3AO14802 1390 aaPredicted RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 SOX6P35712 828 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 FAF2Q96CS3 445 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 NDNQ99608 321 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 RHOBTB2Q9BYZ6 727 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 CYP4F11Q9HBI6 524 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 TUFT1Q9NNX1 390 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 MAP3K20Q9NYL2 800 aaKnown RBP11.33□□□□□ -0.6
CLCN4-202ENST00000380833 DTNAQ9Y4J8 743 aa11.33□□□□□ -0.6
CLCN4-202ENST00000380833 ABCC4O15439 1325 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 NOTOA8MTQ0 251 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 K7ERI5 159 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 CLASP2O75122 1294 aaKnown RBP11.32□□□□□ -0.6
CLCN4-202ENST00000380833 CCDC166P0CW27 439 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 JAK1P23458 1154 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 CDC27P30260 824 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ARHGEF25Q86VW2 580 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 DHX36Q9H2U1 1008 aaKnown RBP11.32□□□□□ -0.6
CLCN4-202ENST00000380833 RPRD1BQ9NQG5 326 aaKnown RBP11.32□□□□□ -0.6
CLCN4-202ENST00000380833 SENP1Q9P0U3 644 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 KLHL8Q9P2G9 620 aaPredicted RBP11.32□□□□□ -0.6
CLCN4-202ENST00000380833 PHF20L1A8MW92 1017 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 H2AFZP0C0S5 128 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 IL13P35225 146 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ZNF157P51786 506 aaPredicted RBP11.32□□□□□ -0.6
CLCN4-202ENST00000380833 H2AFVQ71UI9 128 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 DNAAF2Q9NVR5 837 aaKnown RBP11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ZSCAN32Q9NX65 697 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ADA2Q9NZK5 511 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 GGA2Q9UJY4 613 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 CCDC188H7C350 402 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 BCL10O95999 233 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 APOA4P06727 396 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 KCNJ6P48051 423 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 VSNL1P62760 191 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 C1orf131Q8NDD1 294 aaKnown RBP11.32□□□□□ -0.6
CLCN4-202ENST00000380833 RMDN1Q96DB5 314 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 PCSK1NQ9UHG2 260 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 MAP3K15Q6ZN16 1313 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 C1orf232A0A0U1RR37 186 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 TULP2O00295 520 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ZBED1O96006 694 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ERFP50548 548 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 CCDC142Q17RM4 750 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ACAD11Q709F0 780 aa11.32□□□□□ -0.6
CLCN4-202ENST00000380833 ARMCX2Q7L311 632 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms