RNA–Protein interactions for RNA: ENST00000380756.7

DNMT3A-204, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best)

Gene DNMT3A, Length 4,477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-204ENST00000380756 PLA2G4FQ68DD2 849 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 EPS8L3Q8TE67 593 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 LRRC4Q9HBW1 653 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 PFDN4Q9NQP4 134 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 APOBEC2Q9Y235 224 aaKnown RBP13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 NOD1Q9Y239 953 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 M0QZ92 97 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 BCL9O00512 1426 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 CNGA1P29973 690 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SUPT20HL1Q3ZLR7 823 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 TMEM119Q4V9L6 283 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 MIIPQ5JXC2 388 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 FAM161BQ96MY7 647 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SERPINB12Q96P63 405 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 SLC13A1Q9BZW2 595 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 TRAF3IP3Q9Y228 551 aa13.47□□□□□ -0.25
DNMT3A-204ENST00000380756 TAP1Q03518 808 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 TAF12Q16514 161 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 C1orf146Q5VVC0 180 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 FAM167AQ96KS9 214 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 SENP7Q9BQF6 1050 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 FAM129AQ9BZQ8 928 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 HSD3B7Q9H2F3 369 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 KCNH7Q9NS40 1196 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 PCDHGC5Q9Y5F6 944 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 KITP10721 976 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 KRT3P12035 628 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 SEPT6Q14141 434 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 PRPSAP1Q14558 356 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 ZNF662Q6ZS27 426 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 BZW1Q7L1Q6 419 aaKnown RBP13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 RBBP8NLQ8NC74 664 aaPredicted RBP13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 RNF169Q8NCN4 708 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.25
DNMT3A-204ENST00000380756 RALAP11233 206 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 SCTRP47872 440 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 PTENP60484 403 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 SKOR1P84550 965 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 NUDCD3Q8IVD9 361 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 AGGF1Q8N302 714 aaeCLIP13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 GLIS3Q8NEA6 775 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 ATP8B4Q8TF62 1192 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 SLC35C1Q96A29 364 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 PI4K2AQ9BTU6 479 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 JPH1Q9HDC5 661 aaPredicted RBP13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 OLFML3Q9NRN5 406 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 EPS15L1Q9UBC2 864 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 MID2Q9UJV3 735 aa13.46□□□□□ -0.26
DNMT3A-204ENST00000380756 TNS2Q63HR2 1409 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 IGF2BP3O00425 579 aaKnown RBP eCLIP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 FDX1P10109 184 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 SDC4P31431 198 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 GPC3P51654 580 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 CDH6P55285 790 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 FAM102AQ5T9C2 384 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 DEFB132Q7Z7B7 95 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 DDX27Q96GQ7 796 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 OSBPL1AQ9BXW6 950 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 MRPL4Q9BYD3 311 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 NOD2Q9HC29 1040 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 GDF3Q9NR23 364 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 KIAA0391O15091 583 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 CFLARO15519 480 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 HLA-DRAP01903 254 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 GZMAP12544 262 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 ROR1Q01973 937 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 SPOPLQ6IQ16 392 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 ZNF720Q7Z2F6 126 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 PACS2Q86VP3 889 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 PPWD1Q96BP3 646 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 BTBD6Q96KE9 485 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 TTC1Q99614 292 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 CBWD1Q9BRT8 395 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 POLLQ9UGP5 575 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 KNDC1Q76NI1 1749 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 GOLGA8QA0A0J9YX86 632 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 GOLGA8OA6NCC3 632 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 GOLGA8NF8WBI6 632 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 M0QYV0 167 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 SGPL1O95470 568 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 CCND1P24385 295 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 EIF3EP60228 445 aaKnown RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 ZNF844Q08AG5 666 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 BTNL9Q6UXG8 535 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 LRRC55Q6ZSA7 311 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 OR6B3Q8NGW1 331 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 ATG4AQ8WYN0 398 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 ZNF668Q96K58 619 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 MTMR9Q96QG7 549 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 SEMA4AQ9H3S1 761 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 NPHS2Q9NP85 383 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 BATF3Q9NR55 127 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 PSMC3IPQ9P2W1 217 aaPredicted RBP13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 AFG3L2Q9Y4W6 797 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 C3P01024 1663 aa13.45□□□□□ -0.26
DNMT3A-204ENST00000380756 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms