RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 PTPN21Q16825 1174 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 CCDC142Q17RM4 750 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 PUS10Q3MIT2 529 aaKnown RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 CDCA2Q69YH5 1023 aaPredicted RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 PARM1Q6UWI2 310 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 SUGP1Q8IWZ8 645 aaKnown RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TTC9BQ8N6N2 239 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TDRD5Q8NAT2 981 aaKnown RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 CNNM3Q8NE01 707 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 LNX1Q8TBB1 728 aaPredicted RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 ZNF707Q96C28 371 aaPredicted RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 CDK5RAP3Q96JB5 506 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 NAP1L4Q99733 375 aaKnown RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 KXD1Q9BQD3 176 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 ADPGKQ9BRR6 497 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 EMILIN2Q9BXX0 1053 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 UPF2Q9HAU5 1272 aaKnown RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 CHST7Q9NS84 486 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 PRMT7Q9NVM4 692 aaPredicted RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 KANSL3Q9P2N6 904 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TDRD15B5MCY1 1934 aaKnown RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 ATG2BQ96BY7 2078 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 ADH1AP07327 375 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 C8AP07357 584 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 SKIP12755 728 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 NAMPTP43490 491 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 MRE11P49959 708 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 ATP2C1P98194 919 aaPredicted RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TUSC3Q13454 348 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 PSMD5Q16401 504 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 SLC5A9Q2M3M2 681 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 USP41Q3LFD5 358 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 CD300LGQ6UXG3 332 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TMEM184AQ6ZMB5 413 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 GPR149Q86SP6 731 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 MYCT1Q8N699 235 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TCEAL4Q96EI5 215 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 MCRS1Q96EZ8 462 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TMEM209Q96SK2 561 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 ACO2Q99798 780 aaKnown RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TTPALQ9BTX7 342 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 FOXQ1Q9C009 403 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 FBXL21Q9UKT6 434 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 SLC27A5Q9Y2P5 690 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 GIT1Q9Y2X7 761 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 MTF2Q9Y483 593 aaPredicted RBP5.12□□□□□ -1.59
C9orf72-203ENST00000380003 NUB1Q9Y5A7 615 aa5.12□□□□□ -1.59
C9orf72-203ENST00000380003 TPRP12270 2363 aaKnown RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 NOTCH4Q99466 2003 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 DMXL2Q8TDJ6 3036 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 A0A087X0B3 334 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 KRBA1A5PL33 1030 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 HNRNPDLO14979 420 aaKnown RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 HCRTO43612 131 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 NR1I2O75469 434 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 KRT18P05783 430 aaKnown RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SRGAP2BP0DMP2 458 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SYT1P21579 422 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 AVPR2P30518 371 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 UBA7P41226 1012 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SLC12A3P55017 1021 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 WNT7BP56706 349 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 GPC5P78333 572 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 DSG1Q02413 1049 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 ITIH3Q06033 890 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 GRIK3Q13003 919 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 MTMR3Q13615 1198 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 BMS1Q14692 1282 aaKnown RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 UPP1Q16831 310 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SLC10A6Q3KNW5 377 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 AXDND1Q5T1B0 1012 aaPredicted RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 LMBRD2Q68DH5 695 aaPredicted RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 GPBP1Q86WP2 473 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 COLEC11Q9BWP8 271 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 NT5C3AQ9H0P0 336 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 IRAK3Q9Y616 596 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 NUMBLQ9Y6R0 609 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 CHD8Q9HCK8 2581 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 PLXNA3P51805 1871 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 GOLGA8IPA6NC78 632 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 GOLGA8JA6NMD2 632 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 HOXB8P17481 243 aaPredicted RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 CASP5P51878 434 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SIGLEC14Q08ET2 396 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 RILPL1Q5EBL4 403 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 STXBP5Q5T5C0 1151 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 ERICH6BQ5W0A0 696 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 FBXL6Q8N531 539 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 TMEM161BQ8NDZ6 487 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 FGF13Q92913 245 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 RIPOR3Q96MK2 946 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 CDCA3Q99618 268 aaPredicted RBP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 CRISPLD1Q9H336 500 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SFXN1Q9H9B4 322 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.11□□□□□ -1.59
C9orf72-203ENST00000380003 BLOC1S4Q9NUP1 217 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SORCS3Q9UPU3 1222 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 GTF3C3Q9Y5Q9 886 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 DOCK8Q8NF50 2099 aa5.11□□□□□ -1.59
C9orf72-203ENST00000380003 SF3B1O75533 1304 aaKnown RBP eCLIP5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms