RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 KRT37O76014 449 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 SUPT20HL2P0C7V6 817 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 CYP2C19P33261 490 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 PPARGP37231 505 aaPredicted RBP12.27□□□□□ -0.45
SYNE1-204ENST00000367248 SLC7A5Q01650 507 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 RUSC1Q9BVN2 902 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 NIF3L1Q9GZT8 377 aa12.27□□□□□ -0.45
SYNE1-204ENST00000367248 DDX56Q9NY93 547 aaKnown RBP12.27□□□□□ -0.45
SYNE1-204ENST00000367248 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.27□□□□□ -0.45
SYNE1-204ENST00000367248 DISP2A7MBM2 1401 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 RAD51Q06609 339 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 THEMIS2Q5TEJ8 643 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 SAYSD1Q9NPB0 183 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 H3BRJ5 948 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 EXTL3O43909 919 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 ESRRBO95718 433 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 STAG3L1P0CL83 205 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 SLC9A1P19634 815 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 NOP14P78316 857 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 MRPS25P82663 173 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 BFSP2Q13515 415 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 SDE2Q6IQ49 451 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 PCSK9Q8NBP7 692 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 PKNOX2Q96KN3 472 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 MUC3BQ9H195 1237 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 FHOD1Q9Y613 1164 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 GAKO14976 1311 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 FBXW4P57775 412 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 SYCP2LQ5T4T6 812 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 NOTUMQ6P988 496 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 PBXIP1Q96AQ6 731 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 DDX47Q9H0S4 455 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 XPNPEP3Q9NQH7 507 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 F8W8V4 182 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 B3GAT3O94766 335 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 CLTAP09496 248 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 CDH6P55285 790 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 HEATR6Q6AI08 1181 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 CDKL3Q8IVW4 592 aaPredicted RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 DHX38Q92620 1227 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 TMEM8AQ9HCN3 771 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 SLC18A3Q16572 532 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 NFRKBQ6P4R8 1299 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 TRIM59Q8IWR1 403 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 DCP1BQ8IZD4 617 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 MRIQ9BWK5 157 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 UVRAGQ9P2Y5 699 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 UBQLN1Q9UMX0 589 aaKnown RBP12.26□□□□□ -0.45
SYNE1-204ENST00000367248 NR2E3Q9Y5X4 410 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 RTN2O75298 545 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 CHRNA3P32297 505 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 LY6KQ17RY6 165 aa12.26□□□□□ -0.45
SYNE1-204ENST00000367248 PDGFRAP16234 1089 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 WNT8AQ9H1J5 351 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 CA4P22748 312 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 PCSK1P29120 753 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 BEX3Q00994 111 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ZNF235Q14590 738 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 MMEL1Q495T6 779 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 PRAMEF19Q5SWL8 479 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 PCNX4Q63HM2 1172 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ABCB6Q9NP58 842 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 SETD4Q9NVD3 440 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 CCDC78A2IDD5 438 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ARHGAP42A6NI28 874 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ACSL3O95573 720 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 PKN1Q16512 942 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ITPRIPL1Q6GPH6 555 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 FRA10AC1Q70Z53 315 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 USP33Q8TEY7 942 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 DEPDC1BQ8WUY9 529 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.25□□□□□ -0.45
SYNE1-204ENST00000367248 AGPAT3Q9NRZ7 376 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 BFARQ9NZS9 450 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 TBX20Q9UMR3 447 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 PCDHB2Q9Y5E7 798 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 UBA6A0AVT1 1052 aaPredicted RBP12.25□□□□□ -0.45
SYNE1-204ENST00000367248 VWA5AO00534 786 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 IL31Q6EBC2 164 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 OSBPL9Q96SU4 736 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 P2RX7Q99572 595 aaKnown RBP12.25□□□□□ -0.45
SYNE1-204ENST00000367248 MROH1Q8NDA8 1641 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ZKSCAN8Q15776 578 aaPredicted RBP12.25□□□□□ -0.45
SYNE1-204ENST00000367248 TTC31Q49AM3 519 aaPredicted RBP12.25□□□□□ -0.45
SYNE1-204ENST00000367248 METTL7BQ6UX53 244 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 MMS22LQ6ZRQ5 1243 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ZNF513Q8N8E2 541 aaPredicted RBP12.25□□□□□ -0.45
SYNE1-204ENST00000367248 CPB2Q96IY4 423 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 NDFIP2Q9NV92 336 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 IQANK1A0A1B0GTG1 560 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 DNAJC6O75061 913 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 ARL4DP49703 201 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 SLC26A2P50443 739 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 SYT17Q9BSW7 474 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 APOL5Q9BWW9 433 aa12.25□□□□□ -0.45
SYNE1-204ENST00000367248 NOVA2Q9UNW9 492 aaKnown RBP12.25□□□□□ -0.45
SYNE1-204ENST00000367248 TBKBP1A7MCY6 615 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 ADORA2AP29274 412 aa12.24□□□□□ -0.45
SYNE1-204ENST00000367248 FXR1P51114 621 aaKnown RBP eCLIP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms