RNA–Protein interactions for RNA: ENST00000366683.3

ACTA1-201, Transcript of actin, alpha 1, skeletal muscle, humanhuman

TSL 5 BASIC

Gene ACTA1, Length 1,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1-201ENST00000366683 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.19■□□□□ 0.34
ACTA1-201ENST00000366683 SUGP1Q8IWZ8 645 aaKnown RBP17.19■□□□□ 0.34
ACTA1-201ENST00000366683 FBXL6Q8N531 539 aa17.19■□□□□ 0.34
ACTA1-201ENST00000366683 LRRC15Q8TF66 581 aa17.19■□□□□ 0.34
ACTA1-201ENST00000366683 ZNF707Q96C28 371 aaPredicted RBP17.19■□□□□ 0.34
ACTA1-201ENST00000366683 DDX27Q96GQ7 796 aaKnown RBP17.19■□□□□ 0.34
ACTA1-201ENST00000366683 SNX27Q96L92 541 aa17.19■□□□□ 0.34
ACTA1-201ENST00000366683 ZMAT2Q96NC0 199 aaKnown RBP17.19■□□□□ 0.34
ACTA1-201ENST00000366683 SLC38A7Q9NVC3 462 aa17.19■□□□□ 0.34
ACTA1-201ENST00000366683 ANKFY1Q9P2R3 1169 aa17.19■□□□□ 0.34
ACTA1-201ENST00000366683 MUC6Q6W4X9 2439 aa17.19■□□□□ 0.34
ACTA1-201ENST00000366683 PDCD11Q14690 1871 aaKnown RBP17.18■□□□□ 0.34
ACTA1-201ENST00000366683 DOCK6Q96HP0 2047 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 CLDN3O15551 220 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 PAPLNO95428 1278 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 KRT18P05783 430 aaKnown RBP17.18■□□□□ 0.34
ACTA1-201ENST00000366683 KCNE1P15382 129 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 PLCG1P19174 1290 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 MATR3P43243 847 aaKnown RBP eCLIP17.18■□□□□ 0.34
ACTA1-201ENST00000366683 SOX4Q06945 474 aaPredicted RBP17.18■□□□□ 0.34
ACTA1-201ENST00000366683 MCM6Q14566 821 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 NOLC1Q14978 699 aaKnown RBP eCLIP17.18■□□□□ 0.34
ACTA1-201ENST00000366683 SEZ6Q53EL9 994 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 HAUS6Q7Z4H7 955 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 MYCT1Q8N699 235 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 RAD54LQ92698 747 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 STAMQ92783 540 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 INTS4Q96HW7 963 aaKnown RBP17.18■□□□□ 0.34
ACTA1-201ENST00000366683 REEP2Q9BRK0 252 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 PRKD2Q9BZL6 878 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 CNTN3Q9P232 1028 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 CLUHO75153 1309 aa17.18■□□□□ 0.34
ACTA1-201ENST00000366683 ZMYND10O75800 440 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 FAM13AO94988 1023 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 MARCKSP29966 332 aaPredicted RBP17.17■□□□□ 0.34
ACTA1-201ENST00000366683 GBP2P32456 591 aaPredicted RBP17.17■□□□□ 0.34
ACTA1-201ENST00000366683 DDIT3P35638 169 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 BRCC3P46736 316 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 MCL1Q07820 350 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 PTPAQ15257 358 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 C3orf58Q8NDZ4 430 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 BICD1Q96G01 975 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 CCSER1Q9C0I3 900 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 SMOC2Q9H3U7 446 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 PARVGQ9HBI0 331 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 FBXW11Q9UKB1 542 aa17.17■□□□□ 0.34
ACTA1-201ENST00000366683 DOCK8Q8NF50 2099 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 I3L4J1 428 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 PODXLO00592 558 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 ADAM12O43184 909 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 N4BP1O75113 896 aaKnown RBP17.16■□□□□ 0.34
ACTA1-201ENST00000366683 TKTP29401 623 aaKnown RBP17.16■□□□□ 0.34
ACTA1-201ENST00000366683 RPL9P32969 192 aaKnown RBP17.16■□□□□ 0.34
ACTA1-201ENST00000366683 OR1D2P34982 312 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 RESTQ13127 1097 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 RAB33AQ14088 237 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 SLC10A6Q3KNW5 377 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 SPECC1Q5M775 1068 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 LIN9Q5TKA1 542 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 FAM173BQ6P4H8 233 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 LARP4BQ92615 738 aaKnown RBP17.16■□□□□ 0.34
ACTA1-201ENST00000366683 KCNN1Q92952 543 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 C18orf25Q96B23 403 aaPredicted RBP17.16■□□□□ 0.34
ACTA1-201ENST00000366683 EPSTI1Q96J88 318 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 ZHX3Q9H4I2 956 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 KCNK12Q9HB15 430 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 MTRRQ9UBK8 725 aa17.16■□□□□ 0.34
ACTA1-201ENST00000366683 ZDBF2Q9HCK1 2354 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 K7ELQ4 463 aaPredicted RBP17.15■□□□□ 0.34
ACTA1-201ENST00000366683 MEFVO15553 781 aaPredicted RBP17.15■□□□□ 0.34
ACTA1-201ENST00000366683 TRAK2O60296 914 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 HNRNPA1P09651 372 aaKnown RBP eCLIP17.15■□□□□ 0.34
ACTA1-201ENST00000366683 SCP2P22307 547 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 LIG4P49917 911 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 ZNF131P52739 623 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 CEBPZQ03701 1054 aaKnown RBP17.15■□□□□ 0.34
ACTA1-201ENST00000366683 TDGQ13569 410 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 PPM1LQ5SGD2 360 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 IER5LQ5T953 404 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 ANKS3Q6ZW76 656 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 USP49Q70CQ1 688 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 HAPLN2Q9GZV7 340 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 PLEKHA5Q9HAU0 1116 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 IGSF9Q9P2J2 1179 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 CCDC39Q9UFE4 941 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
ACTA1-201ENST00000366683 TBX20Q9UMR3 447 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 SRPRBQ9Y5M8 271 aaKnown RBP17.15■□□□□ 0.34
ACTA1-201ENST00000366683 BACE2Q9Y5Z0 518 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 CDY1Q9Y6F8 540 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 KMT2EQ8IZD2 1858 aa17.15■□□□□ 0.34
ACTA1-201ENST00000366683 K7ENM7 598 aa17.14■□□□□ 0.33
ACTA1-201ENST00000366683 TBCAO75347 108 aaKnown RBP17.14■□□□□ 0.33
ACTA1-201ENST00000366683 PDGFBP01127 241 aaPredicted RBP17.14■□□□□ 0.33
ACTA1-201ENST00000366683 C8AP07357 584 aa17.14■□□□□ 0.33
ACTA1-201ENST00000366683 CLTAP09496 248 aa17.14■□□□□ 0.33
ACTA1-201ENST00000366683 AVPR2P30518 371 aa17.14■□□□□ 0.33
ACTA1-201ENST00000366683 UVSSAQ2YD98 709 aa17.14■□□□□ 0.33
ACTA1-201ENST00000366683 AXDND1Q5T1B0 1012 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms