RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-201ENST00000361866 RIPK2O43353 540 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 ELF3P78545 371 aaPredicted RBP14.72□□□□□ -0.05
COL6A1-201ENST00000361866 HGSNATQ68CP4 663 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 RGS9BPQ6ZS82 235 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 C3orf62Q6ZUJ4 267 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 ARHGAP27Q6ZUM4 889 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 ATP11CQ8NB49 1132 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 SLC26A7Q8TE54 656 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 CDKL2Q92772 493 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 HAS1Q92839 578 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 MPHOSPH6Q99547 160 aaKnown RBP14.72□□□□□ -0.05
COL6A1-201ENST00000361866 TTYH3Q9C0H2 523 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 NEUROG2Q9H2A3 272 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 METTL5Q9NRN9 209 aaKnown RBP14.72□□□□□ -0.05
COL6A1-201ENST00000361866 KDM4FA0A1W2PPD8 638 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 RARAP10276 462 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 KRT4P19013 534 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 SMARCA1P28370 1054 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 YWHAEP62258 255 aaKnown RBP14.72□□□□□ -0.05
COL6A1-201ENST00000361866 CRYMQ14894 314 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 MKNK1Q9BUB5 465 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 HESX1Q9UBX0 185 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 CHMP2BQ9UQN3 213 aa14.72□□□□□ -0.05
COL6A1-201ENST00000361866 TBX3O15119 743 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 PRPSAP2O60256 369 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 RRM1P23921 792 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 ASPHQ12797 758 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 ZNF662Q6ZS27 426 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 C3orf20Q8ND61 904 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 NLRP4Q96MN2 994 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 SERPINB12Q96P63 405 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 TUBB6Q9BUF5 446 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 NUF2Q9BZD4 464 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 KCNG1Q9UIX4 513 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 C3P01024 1663 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 CALCAP01258 141 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 ALDH18A1P54886 795 aaKnown RBP14.71□□□□□ -0.05
COL6A1-201ENST00000361866 ITIH4Q14624 930 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 RAPH1Q70E73 1250 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 VCX3AQ9NNX9 186 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 TOPORSQ9NS56 1045 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-201ENST00000361866 PIAS1O75925 651 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 MMP10P09238 476 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 UBTFL6P0CB48 400 aaPredicted RBP14.71□□□□□ -0.05
COL6A1-201ENST00000361866 TMEM119Q4V9L6 283 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 RABGAP1LQ5R372 815 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 SLC30A9Q6PML9 568 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 SESTD1Q86VW0 696 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 NUDCD3Q8IVD9 361 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 WDR75Q8IWA0 830 aaKnown RBP14.71□□□□□ -0.05
COL6A1-201ENST00000361866 AGGF1Q8N302 714 aaeCLIP14.71□□□□□ -0.05
COL6A1-201ENST00000361866 AGAP11Q8TF27 550 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 PPWD1Q96BP3 646 aaKnown RBP14.71□□□□□ -0.05
COL6A1-201ENST00000361866 PWWP2AQ96N64 755 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 TSSK1BQ9BXA7 367 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 SHCBP1LQ9BZQ2 653 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 GTF3C4Q9UKN8 822 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 NAALADL1Q9UQQ1 740 aa14.71□□□□□ -0.05
COL6A1-201ENST00000361866 A6NJR5 290 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 FAM86B1E9PN63 330 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 NVLO15381 856 aaKnown RBP14.71□□□□□ -0.06
COL6A1-201ENST00000361866 FAM86B2P0C5J1 330 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 SLC8A3P57103 927 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 DNAAF3Q8N9W5 541 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 SHISA4Q96DD7 197 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 THTPAQ9BU02 230 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 IRAK4Q9NWZ3 460 aa14.71□□□□□ -0.06
COL6A1-201ENST00000361866 SHOX2O60902 331 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-201ENST00000361866 MAP3K6O95382 1288 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 LMNAP02545 664 aaKnown RBP14.7□□□□□ -0.06
COL6A1-201ENST00000361866 CNKSR1Q969H4 720 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 HEXIM2Q96MH2 286 aaKnown RBP14.7□□□□□ -0.06
COL6A1-201ENST00000361866 MCEEQ96PE7 176 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 RBAKQ9NYW8 714 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-201ENST00000361866 TRIM33Q9UPN9 1127 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 CACNA1FO60840 1977 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 ARP10275 920 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 CNGA1P29973 690 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 PSMC1P62191 440 aaKnown RBP14.7□□□□□ -0.06
COL6A1-201ENST00000361866 SLC27A3Q5K4L6 730 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 C1orf228Q6PIY5 440 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 TRIM42Q8IWZ5 723 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 DEPDC1BQ8WUY9 529 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 B2RBV5 119 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 EML1O00423 815 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 ZWINTO95229 277 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 CTCFP49711 727 aaPredicted RBP14.7□□□□□ -0.06
COL6A1-201ENST00000361866 KLHL38Q2WGJ6 581 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 SEZ6Q53EL9 994 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 ATG16L1Q676U5 607 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 ZNF720Q7Z2F6 126 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 IRF2BP2Q7Z5L9 587 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 NIM1KQ8IY84 436 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 MREGQ8N565 214 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 TAS1R2Q8TE23 839 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 GANQ9H2C0 597 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 NDE1Q9NXR1 346 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 DONSONQ9NYP3 566 aa14.7□□□□□ -0.06
COL6A1-201ENST00000361866 TRAF3IP3Q9Y228 551 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms