RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 MSH4O15457 936 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 RPP40O75818 363 aaKnown RBP6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 MUTP22033 750 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 SP100P23497 879 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 PSMC5P62195 406 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 COL9A3Q14050 684 aaPredicted RBP6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 PTPAQ15257 358 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 UBE2SQ16763 222 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 GALNT17Q6IS24 598 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 LPPQ93052 612 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 KIF9Q9HAQ2 790 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 PIAS3Q9Y6X2 628 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 BAZ2BQ9UIF8 2168 aaKnown RBP6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 VPS13AQ96RL7 3174 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 NYNRINQ9P2P1 1898 aaKnown RBP6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 SPECC1L-ADORA2AF8WAN1 911 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 PTGESO14684 152 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 CTHP32929 405 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 DRP2Q13474 957 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 SLC27A1Q6PCB7 646 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 BICD2Q8TD16 824 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 UNC45AQ9H3U1 944 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 CAPN10Q9HC96 672 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 TMEM9BQ9NQ34 198 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 RCAN3Q9UKA8 241 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 SPEGQ15772 3267 aa6.68□□□□□ -1.34
CDC42SE2-201ENST00000360515 PLA2G2AP14555 144 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 KCNE1P15382 129 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 DRD1P21728 446 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 RFX1P22670 979 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 AFF1P51825 1210 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 LIN9Q5TKA1 542 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 TSSK4Q6SA08 328 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 KBTBD6Q86V97 674 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 FAM83CQ9BQN1 747 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 TOMM22Q9NS69 142 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 ANKEF1Q9NU02 776 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 AFF4Q9UHB7 1163 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 PIN4Q9Y237 131 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 RBAK-RBAKDNI3L0D1 243 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 PRPF3O43395 683 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 DHX16O60231 1041 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 UPP1Q16831 310 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 RIF1Q5UIP0 2472 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 RNF43Q68DV7 783 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 TWF2Q6IBS0 349 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 PPP4R3AQ6IN85 833 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 HOMER1Q86YM7 354 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 C12orf50Q8NA57 414 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 CEP76Q8TAP6 659 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 NLRP7Q8WX94 980 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 DDX27Q96GQ7 796 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 ZFP91Q96JP5 570 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 KXD1Q9BQD3 176 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 IL25Q9H293 177 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 ARRDC1-AS1Q9H2J1 176 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 NXF3Q9H4D5 531 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 MINDY3Q9H8M7 445 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 MTMR7Q9Y216 660 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 LNP1A1A4G5 178 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 M0QZQ0 153 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 SGSM2O43147 1006 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 CBFA2T3O75081 653 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 RPL17P18621 184 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 RNASELQ05823 741 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 LAMTOR4Q0VGL1 99 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 TRDNQ13061 729 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 CAMK2BQ13554 666 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 PSAPL1Q6NUJ1 521 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 CCDC12Q8WUD4 166 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 CNOT6LQ96LI5 555 aaKnown RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 FAM20AQ96MK3 541 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 FAM193BQ96PV7 902 aaPredicted RBP6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 SCNM1Q9BWG6 230 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 TEKT3Q9BXF9 490 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 PIDD1Q9HB75 910 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 RAI2Q9Y5P3 530 aa6.67□□□□□ -1.34
CDC42SE2-201ENST00000360515 OAZ2O95190 189 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 VNN2O95498 520 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 RPL9P32969 192 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 POU5F1Q01860 360 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 MYBPC2Q14324 1141 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 SF3A2Q15428 464 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 FSTL4Q6MZW2 842 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 TMPRSS7Q7RTY8 843 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 EXOC4Q96A65 974 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 RSPRY1Q96DX4 576 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 NAP1L4Q99733 375 aaKnown RBP6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 EDEM2Q9BV94 578 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 CD248Q9HCU0 757 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 FRYLO94915 3013 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 CLEC18AA5D8T8 446 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 H7C4K7 107 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 ZNF263O14978 683 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 MCM5P33992 734 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 CCR2P41597 374 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 SCRN1Q12765 414 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 SH3PXD2AQ5TCZ1 1133 aa6.66□□□□□ -1.34
CDC42SE2-201ENST00000360515 C20orf194Q5TEA3 1177 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms