RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 PGM2Q96G03 612 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 STXBP5LQ9Y2K9 1186 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 FRMPD4Q14CM0 1322 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PLXNC1O60486 1568 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 COPS2P61201 443 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 MOGSQ13724 837 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PTGISQ16647 500 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 NLRP3Q96P20 1036 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CENPXA8MT69 81 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 KCNK1O00180 336 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 RNF113AO15541 343 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 LCP1P13796 627 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 C1orf228Q6PIY5 440 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 S100PBPQ96BU1 408 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 C8orf48Q96LL4 319 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TEX13BQ9BXU2 312 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ENOPH1Q9UHY7 261 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 A0A1W2PQC6 194 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TRDMT1O14717 391 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 GNAQP50148 359 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 C12orf60Q5U649 245 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 BSPRYQ5W0U4 402 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF574Q6ZN55 896 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 GPBP1Q86WP2 473 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 KCNK16Q96T55 309 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 TMEM109Q9BVC6 243 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 FTOQ9C0B1 505 aaKnown RBP eCLIP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PTTG3PQ9NZH4 202 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 CHIC2Q9UKJ5 165 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PPP2R2CQ9Y2T4 447 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ASB4Q9Y574 426 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 THOC2Q8NI27 1593 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 C7P10643 843 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PLCG1P19174 1290 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 VBP1P61758 197 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 YWHAEP62258 255 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 ARHGEF16Q5VV41 709 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 UTS2BQ765I0 119 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 OR8K3Q8NH51 312 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PIGOQ8TEQ8 1089 aa3.96□□□□□ -1.78
SYNE2-202ENST00000344113 SMG5Q9UPR3 1016 aaKnown RBP3.96□□□□□ -1.78
SYNE2-202ENST00000344113 PKLRP30613 574 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 GNG2P59768 71 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 GALNT1Q10472 559 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CCDC28AQ8IWP9 274 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PCDHB6Q9Y5E3 794 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 INO80B-WBP1J3KQ70 363 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 UBA7P41226 1012 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DNA2P51530 1060 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 BCAP31P51572 246 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CKAP2LQ8IYA6 745 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PYCARDQ9ULZ3 195 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ABCC2Q92887 1545 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 H3BM21 787 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 IFNA14P01570 189 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MARK2Q7KZI7 788 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NECAB2Q7Z6G3 386 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PHC3Q8NDX5 983 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF184Q99676 751 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 KATNAL1Q9BW62 490 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 EPB41L4AQ9HCS5 686 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 IARS2Q9NSE4 1012 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 IPO11Q9UI26 975 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MOSPD1Q9UJG1 213 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 GFPT2O94808 682 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MSH3P20585 1137 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CDH3P22223 829 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 COPZ1P61923 177 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 WDR45BQ5MNZ6 344 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PLEKHM3Q6ZWE6 761 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLC22A15Q8IZD6 547 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 GOLM1Q8NBJ4 401 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PYROXD1Q8WU10 500 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 WWP1Q9H0M0 922 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLC12A4Q9UP95 1085 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SETD3Q86TU7 594 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CRLF3Q8IUI8 442 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 FIG4Q92562 907 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SGK3Q96BR1 496 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CYFIP2Q96F07 1278 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 CYTH4Q9UIA0 394 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MKLN1Q9UL63 735 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 DYNC1LI2O43237 492 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PIM1P11309 404 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLC44A2Q8IWA5 706 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 TAB3Q8N5C8 712 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NUDT12Q9BQG2 462 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 GLT8D2Q9H1C3 349 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ABCC5O15440 1437 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PRMT3O60678 531 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 BCAR3O75815 825 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MORC3Q14149 939 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 PIK3AP1Q6ZUJ8 805 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 NRBP1Q9UHY1 535 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 ARHGEF10O15013 1369 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 KLHL2O95198 593 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 EPN2O95208 641 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 RPL22P35268 128 aaKnown RBP3.95□□□□□ -1.78
SYNE2-202ENST00000344113 SLC12A2P55011 1212 aa3.95□□□□□ -1.78
SYNE2-202ENST00000344113 MTERF2Q49AM1 385 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms