RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 SPIRE2Q8WWL2 714 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 ERP44Q9BS26 406 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 TMEM117Q9H0C3 514 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 KCTD10Q9H3F6 313 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SAYSD1Q9NPB0 183 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SNX9Q9Y5X1 595 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 MAGEB2O15479 319 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 CETPP11597 493 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 GZMAP12544 262 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 SDC4P31431 198 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 MAGOHP61326 146 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 PPP3CAQ08209 521 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 NCOA4Q13772 614 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 BYSLQ13895 437 aaKnown RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 FAM102AQ5T9C2 384 aaPredicted RBP6.69□□□□□ -1.34
PRKDC-202ENST00000338368 TATDN2Q93075 761 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 FGFBP2Q9BYJ0 223 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 NACA2Q9H009 215 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 CYP39A1Q9NYL5 469 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 BAIAP2L1Q9UHR4 511 aa6.69□□□□□ -1.34
PRKDC-202ENST00000338368 A0A0A6YYK5 440 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ZBED1O96006 694 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 KRT17Q04695 432 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 MEI1Q5TIA1 1274 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 PYROXD1Q8WU10 500 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 TLR10Q9BXR5 811 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ANKZF1Q9H8Y5 726 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CNOT10Q9H9A5 744 aaKnown RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 LRRIQ3A6PVS8 624 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 GTF2H1P32780 548 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 NLRP11P59045 1033 aaKnown RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CAV1Q03135 178 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 IFT88Q13099 833 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 METTL23Q86XA0 190 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 P2RX7Q99572 595 aaKnown RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 SPATC1LQ9H0A9 340 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 PRKCIP41743 596 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 TAP1Q03518 808 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CUL2Q13617 745 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 LAMC2Q13753 1193 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ACAD10Q6JQN1 1059 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 TTC39CQ8N584 583 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 KIF12Q96FN5 646 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ISCUQ9H1K1 167 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 USP20Q9Y2K6 914 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 MYH1P12882 1939 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 MYH4Q9Y623 1939 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 A0A087WUV0 522 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 PJA2O43164 708 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 BRAFP15056 766 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 OAZ1P54368 228 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CNTN2Q02246 1040 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 IL31RAQ8NI17 732 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 A1CFQ9NQ94 594 aaKnown RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 PRMT7Q9NVM4 692 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 HPCAL4Q9UM19 191 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ZC3H11AO75152 810 aaKnown RBP eCLIP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 MT-ND3P03897 115 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ITIH2P19823 946 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 KCNJ1P48048 391 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 TAF1CQ15572 869 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 JAMLQ86YT9 394 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 GPC2Q8N158 579 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ARL1P40616 181 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ALDH5A1P51649 535 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 SLC13A5Q86YT5 568 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 TOPAZ1Q8N9V7 1692 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ZBTB24O43167 697 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 PHF2O75151 1096 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 KRT7P08729 469 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 TGFB3P10600 412 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CBWD6Q4V339 395 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 C2CD6Q53TS8 623 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CBWD3Q5JTY5 395 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CBWD5Q5RIA9 395 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ABI1Q8IZP0 508 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 BAP1Q92560 729 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 WDR35Q9P2L0 1181 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 MYO5BQ9ULV0 1848 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 LRRC37A3O60309 1634 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 IGLV3-22A0A075B6J6 115 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 C9orf131Q5VYM1 1079 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 MROH8Q9H579 483 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 DDX56Q9NY93 547 aaKnown RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 PLIN4Q96Q06 1357 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 RASA4BC9J798 803 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ADM5C9JUS6 153 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 RASA4O43374 803 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ABL1P00519 1130 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CA4P22748 312 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CLCN3P51790 818 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 CDC42EP1Q00587 391 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 IZUMO3Q5VZ72 239 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 SLC20A1Q8WUM9 679 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 COL1A1P02452 1464 aaPredicted RBP6.68□□□□□ -1.34
PRKDC-202ENST00000338368 PLA2G6O60733 806 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 STILQ15468 1287 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 ZCWPW2Q504Y3 356 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 METTL7BQ6UX53 244 aa6.68□□□□□ -1.34
PRKDC-202ENST00000338368 GPRC5AQ8NFJ5 357 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms