RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 FZD9O00144 591 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 OPA1O60313 960 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 LIG3P49916 1009 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 MAGOHP61326 146 aaKnown RBP11.39□□□□□ -0.59
CUL4A-201ENST00000326335 RPL7AP62424 266 aaKnown RBP11.39□□□□□ -0.59
CUL4A-201ENST00000326335 CDO1Q16878 200 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 MAP4K3Q8IVH8 894 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 ZDHHC14Q8IZN3 488 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 EMC1Q8N766 993 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 MTMR14Q8NCE2 650 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 FMO2Q99518 471 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 DBR1Q9UK59 544 aaKnown RBP11.39□□□□□ -0.59
CUL4A-201ENST00000326335 POLIQ9UNA4 740 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 RPTORQ8N122 1335 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 VGLL3A8MV65 326 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 NOP14P78316 857 aaKnown RBP11.39□□□□□ -0.59
CUL4A-201ENST00000326335 NCOA4Q13772 614 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 CAPSQ13938 189 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 SGO2Q562F6 1265 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 PRAMEF19Q5SWL8 479 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 ABHD15Q6UXT9 468 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 C1orf131Q8NDD1 294 aaKnown RBP11.39□□□□□ -0.59
CUL4A-201ENST00000326335 MCPH1Q8NEM0 835 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 HELQQ8TDG4 1101 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 OPTNQ96CV9 577 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 APOBEC3GQ9HC16 384 aaKnown RBP11.39□□□□□ -0.59
CUL4A-201ENST00000326335 TMEM8AQ9HCN3 771 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 CHST7Q9NS84 486 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 CALCOCO1Q9P1Z2 691 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 HTTP42858 3142 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 TMEM191BP0C7N4 346 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 MYZAPP0CAP1 466 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 GTF2H1P32780 548 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 WDR72Q3MJ13 1102 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 ZNF568Q3ZCX4 644 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 EEF1DP3Q658K8 133 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 TTC27Q6P3X3 843 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 ZC3H3Q8IXZ2 948 aaKnown RBP11.39□□□□□ -0.59
CUL4A-201ENST00000326335 NETO2Q8NC67 525 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 PBKQ96KB5 322 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 HES2Q9Y543 173 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 QSER1Q2KHR3 1735 aa11.39□□□□□ -0.59
CUL4A-201ENST00000326335 CXCL8P10145 99 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 RPS12P25398 132 aaKnown RBP11.38□□□□□ -0.59
CUL4A-201ENST00000326335 NRLP54845 237 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 GPR162Q16538 588 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 EMBQ6PCB8 327 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 JAMLQ86YT9 394 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 ANKRD42Q8N9B4 389 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 ATP8B4Q8TF62 1192 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 GPRASP2Q96D09 838 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 SEMA4AQ9H3S1 761 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 KCND2Q9NZV8 630 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 RTN2O75298 545 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 ZSCAN5DPP0CG00 497 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 NR1D1P20393 614 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 IRAK1P51617 712 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 RBBP8NLQ8NC74 664 aaPredicted RBP11.38□□□□□ -0.59
CUL4A-201ENST00000326335 IWS1Q96ST2 819 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 HERPUD2Q9BSE4 406 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 DDX3YO15523 660 aaKnown RBP11.38□□□□□ -0.59
CUL4A-201ENST00000326335 RARAP10276 462 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 PRLRP16471 622 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 NUMBP49757 651 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 NCKAP1LP55160 1127 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 ZNF662Q6ZS27 426 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.38□□□□□ -0.59
CUL4A-201ENST00000326335 UBXN6Q9BZV1 441 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 RNPEPQ9H4A4 650 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 ANKEF1Q9NU02 776 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 PNMA2Q9UL42 364 aa11.38□□□□□ -0.59
CUL4A-201ENST00000326335 R3HDM2Q9Y2K5 976 aaKnown RBP11.38□□□□□ -0.59
CUL4A-201ENST00000326335 SYNJ2BP-COX16A0A087WUM0 186 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 GTPBP10A4D1E9 387 aaKnown RBP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 ETS1P14921 441 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 ADCY8P40145 1251 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 PPFIA1Q13136 1202 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 EFCAB12Q6NXP0 572 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 CDCA5Q96FF9 252 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 MCEEQ96PE7 176 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 DDX23Q9BUQ8 820 aaKnown RBP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 COX16Q9P0S2 106 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 SUCLA2Q9P2R7 463 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 ZC3H4Q9UPT8 1303 aaKnown RBP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 TLR3O15455 904 aaKnown RBP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 TUBBP07437 444 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 RALAP11233 206 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 CTNNA2P26232 953 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 TUBB4BP68371 445 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 SLC29A2Q14542 456 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 UAP1Q16222 522 aaPredicted RBP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 LONRF1Q17RB8 773 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 C10orf76Q5T2E6 689 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 UBA3Q8TBC4 463 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 EPS8L3Q8TE67 593 aaKnown RBP11.37□□□□□ -0.59
CUL4A-201ENST00000326335 HES6Q96HZ4 224 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 C9orf72Q96LT7 481 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 MINDY3Q9H8M7 445 aa11.37□□□□□ -0.59
CUL4A-201ENST00000326335 KCNK9Q9NPC2 374 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms