RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 HCSTQ9UBK5 93 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 PARP2Q9UGN5 583 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 CHD9Q3L8U1 2897 aa10.29□□□□□ -0.76
RFX3-201ENST00000302303 BECN2A8MW95 431 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 EFCAB14O75071 495 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 DDHD2O94830 711 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 IL18RAPO95256 599 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 VNN1O95497 513 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 FGFR1OPO95684 399 aaKnown RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 SCNN1GP51170 649 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 GUCY2FP51841 1108 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 COPB1P53618 953 aaKnown RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 HTRA4P83105 476 aaPredicted RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 KCNMA1Q12791 1236 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 KCNH2Q12809 1159 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 NR1I3Q14994 352 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 TPD52L1Q16890 204 aaPredicted RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 TDRD10Q5VZ19 366 aaKnown RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 FAM109BQ6ICB4 259 aaPredicted RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 PSRC1Q6PGN9 363 aaPredicted RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 CD300LGQ6UXG3 332 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 SV2AQ7L0J3 742 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 APBB1IPQ7Z5R6 666 aaPredicted RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 ZNF280BQ86YH2 543 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 C1orf127Q8N9H9 656 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 RNF169Q8NCN4 708 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 LMO3Q8TAP4 145 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 HELQQ8TDG4 1101 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 PGBD4Q96DM1 585 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 CGRRF1Q99675 332 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 LBHD1Q9BQE6 289 aaPredicted RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 TMEM117Q9H0C3 514 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 TAB2Q9NYJ8 693 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 CACNG4Q9UBN1 327 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 TUBGCP4Q9UGJ1 667 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 SIX4Q9UIU6 781 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 COQ4Q9Y3A0 265 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 C2CD2Q9Y426 696 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 PCDHB7Q9Y5E2 793 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 RALGAPA2Q2PPJ7 1873 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 CITO14578 2027 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 A0A1B0GTH6 734 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 ANO9A1A5B4 782 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 PPEF2O14830 753 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 PMM2O15305 246 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 TEX33O43247 280 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 ABCB7O75027 752 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 UPP2O95045 317 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 POMCP01189 267 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 DLATP10515 647 aaKnown RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 ACTN1P12814 892 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 IBSPP21815 317 aaPredicted RBP10.28□□□□□ -0.76
RFX3-201ENST00000302303 GCLMP48507 274 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 FANCCQ00597 558 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 DSC1Q08554 894 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 MAN2A1Q16706 1144 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 ZACNQ401N2 412 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 CCDC40Q4G0X9 1142 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 VWA3BQ502W6 1294 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 NOMO2Q5JPE7 1267 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 WDR49Q8IV35 697 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 CD302Q8IX05 232 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 SEMA4DQ92854 862 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 FAM212AQ96EL1 285 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 PAAF1Q9BRP4 392 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 MTMR12Q9C0I1 747 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 VPS16Q9H269 839 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 NDST4Q9H3R1 872 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 GOLGA2P5Q9HBQ8 144 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 UBN1Q9NPG3 1134 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 TBC1D13Q9NVG8 400 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 DERAQ9Y315 318 aa10.28□□□□□ -0.76
RFX3-201ENST00000302303 PDCD11Q14690 1871 aaKnown RBP10.27□□□□□ -0.76
RFX3-201ENST00000302303 FNDC1Q4ZHG4 1894 aaPredicted RBP10.27□□□□□ -0.76
RFX3-201ENST00000302303 CHD7Q9P2D1 2997 aa10.27□□□□□ -0.76
RFX3-201ENST00000302303 GJB5O95377 273 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 AMHP03971 560 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 BMP8BP34820 402 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 PBX1P40424 430 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 FMO5P49326 533 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 YARSP54577 528 aaKnown RBP10.27□□□□□ -0.77
RFX3-201ENST00000302303 PPP2R3AQ06190 1150 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 PTPN21Q16825 1174 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 SARM1Q6SZW1 724 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 TRAPPC11Q7Z392 1133 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 FAM114A1Q8IWE2 563 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 COLGALT2Q8IYK4 626 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 TAS1R2Q8TE23 839 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 ELMO3Q96BJ8 720 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 KIF12Q96FN5 646 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 XYLT2Q9H1B5 865 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 CWH43Q9H720 699 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 NRDE2Q9H7Z3 1164 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 DNAJB4Q9UDY4 337 aa10.27□□□□□ -0.77
RFX3-201ENST00000302303 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.27□□□□□ -0.77
RFX3-201ENST00000302303 CEP290O15078 2479 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 GRXCR1A8MXD5 290 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 F8W810 466 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 GOLGA6L19H0YKK7 550 aa10.26□□□□□ -0.77
RFX3-201ENST00000302303 PIRO00625 290 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms