RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RNF220Q5VTB9 566 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 IZUMO3Q5VZ72 239 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 TMEM154Q6P9G4 183 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 GLIS1Q8NBF1 620 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 FAM20AQ96MK3 541 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 RBM15Q96T37 977 aaKnown RBP eCLIP13.75□□□□□ -0.21
COL8A1-202ENST00000273342 DENND2DQ9H6A0 471 aaPredicted RBP13.75□□□□□ -0.21
COL8A1-202ENST00000273342 VPS37BQ9H9H4 285 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 UBN1Q9NPG3 1134 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 DLGAP2Q9P1A6 1054 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 SPATA31A5Q5VU36 1347 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 SPATA31A7Q8IWB4 1347 aa13.75□□□□□ -0.21
COL8A1-202ENST00000273342 ARHGEF35A5YM69 484 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CDH16O75309 829 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 GAS8O95995 478 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 HLA-DOAP06340 250 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 TPBGLP0DKB5 382 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 GNAT1P11488 350 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CCNB1P14635 433 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 MXI1P50539 228 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 POLGP54098 1239 aaPredicted RBP13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CCDC6Q16204 474 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 OTOP1Q7RTM1 612 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 TMEM117Q9H0C3 514 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 LRRC19Q9H756 370 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 LRRC4BQ9NT99 713 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 A0A1W2PPM1 405 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CYP3A4P08684 503 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 RFC5P40937 340 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CLUL1Q15846 466 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CYP1B1Q16678 543 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 P3H1Q32P28 736 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 Q4G0T1 1027 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 AP1ARQ63HQ0 302 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CDC42EP5Q6NZY7 148 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 MTDHQ86UE4 582 aaKnown RBP13.74□□□□□ -0.21
COL8A1-202ENST00000273342 PASD1Q8IV76 773 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 STK32AQ8WU08 396 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CRYGNQ8WXF5 182 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 TSC22D3Q99576 134 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 GPRC5CQ9NQ84 441 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 WHRNQ9P202 907 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 NOCTQ9UK39 431 aaKnown RBP13.74□□□□□ -0.21
COL8A1-202ENST00000273342 EIF3DO15371 548 aaKnown RBP eCLIP13.74□□□□□ -0.21
COL8A1-202ENST00000273342 T-ENOLP0DO92 83 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 YY1P25490 414 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 SREBF1P36956 1147 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 ICA1Q05084 483 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 AP3B2Q13367 1082 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 ZYXQ15942 572 aaKnown RBP13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CERKLQ49MI3 558 aaPredicted RBP13.74□□□□□ -0.21
COL8A1-202ENST00000273342 RNF43Q68DV7 783 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 RHBDF2Q6PJF5 856 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CBWD2Q8IUF1 395 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 RNF217Q8TC41 542 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 ACSF2Q96CM8 615 aaPredicted RBP13.74□□□□□ -0.21
COL8A1-202ENST00000273342 MBOAT7Q96N66 472 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 MKNK1Q9BUB5 465 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 KIFC3Q9BVG8 833 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 DMAC2Q9NW81 257 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 CYP39A1Q9NYL5 469 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 NUMBLQ9Y6R0 609 aa13.74□□□□□ -0.21
COL8A1-202ENST00000273342 GAKO14976 1311 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 ARP10275 920 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 FGFR1P11362 822 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 KRT10P13645 584 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 CYP11B1P15538 503 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 PSMC4P43686 418 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 SLC1A5Q15758 541 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 ATP13A4Q4VNC1 1196 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 KHDC1Q4VXA5 237 aaKnown RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 ANKMY2Q8IV38 441 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 LRRC8CQ8TDW0 803 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 PSPC1Q8WXF1 523 aaKnown RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 SLC7A6OSQ96CW6 309 aaPredicted RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 CCDC77Q9BR77 488 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 LXNQ9BS40 222 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 POLR3CQ9BUI4 534 aaPredicted RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 TRABDQ9H4I3 376 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 SMCHD1A6NHR9 2005 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 ARFGEF1Q9Y6D6 1849 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 A0A0G2JND7 137 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 LRRD1A4D1F6 860 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 CFAP69A5D8W1 941 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 C2orf71A6NGG8 1288 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 DDTLA6NHG4 134 aaPredicted RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 MAPK13O15264 365 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 LUC7L3O95232 432 aaKnown RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 GGPS1O95749 300 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 IL1R1P14778 569 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 GNAZP19086 355 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 MAGEA4P43358 317 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 NOP14P78316 857 aaKnown RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 ZNF568Q3ZCX4 644 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 SYDE2Q5VT97 1194 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 LMBRD2Q68DH5 695 aaPredicted RBP13.73□□□□□ -0.21
COL8A1-202ENST00000273342 DAW1Q8N136 415 aa13.73□□□□□ -0.21
COL8A1-202ENST00000273342 ANKRD35Q8N283 1001 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms