RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 UTYO14607 1347 aa18.96■□□□□ 0.63
COL5A3-201ENST00000264828 MRPL28Q13084 256 aaKnown RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 SRLQ86TD4 932 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 RIN2Q8WYP3 895 aaPredicted RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 DCP1AQ9NPI6 582 aaPredicted RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 HPS4Q9NQG7 708 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 INPP5AQ14642 412 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 TMEM154Q6P9G4 183 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 PPHLN1Q8NEY8 458 aaKnown RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 AGO2Q9UKV8 859 aaKnown RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 ENO4A6NNW6 628 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 TCN1P20061 433 aaPredicted RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 COPB2P35606 906 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 ARHGEF6Q15052 776 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 OLFML2BQ68BL8 750 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 GALNT4Q8N4A0 578 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 RNF146Q9NTX7 359 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 ZBTB22O15209 634 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 GUF1Q8N442 669 aaKnown RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 KIF2BQ8N4N8 673 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 PKD2L2Q9NZM6 624 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 A0A1W2PQC6 194 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 QRICH1Q2TAL8 776 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 USP33Q8TEY7 942 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 ARHGEF1Q92888 912 aaKnown RBP18.95■□□□□ 0.62
COL5A3-201ENST00000264828 CCT8L2Q96SF2 557 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 PCMTD2Q9NV79 361 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 ATP11BQ9Y2G3 1177 aa18.95■□□□□ 0.62
COL5A3-201ENST00000264828 PITPNM2Q9BZ72 1349 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 MYO1GB0I1T2 1018 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 KCNA3P22001 575 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 TRIM60Q495X7 471 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 PAWRQ96IZ0 340 aaKnown RBP18.94■□□□□ 0.62
COL5A3-201ENST00000264828 ELMO2Q96JJ3 720 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 TRIM66O15016 1216 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 AGTP01019 485 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 CATSPER1Q8NEC5 780 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 ATL2Q8NHH9 583 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 NSUN6Q8TEA1 469 aaKnown RBP18.94■□□□□ 0.62
COL5A3-201ENST00000264828 HSPBP1Q9NZL4 362 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 XPO7Q9UIA9 1087 aaKnown RBP18.94■□□□□ 0.62
COL5A3-201ENST00000264828 ZDHHC9Q9Y397 364 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 PFASO15067 1338 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 PHF2O75151 1096 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 WDR47O94967 919 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 ZNF235Q14590 738 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 TMCO5AQ8N6Q1 288 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 CYFIP2Q96F07 1278 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 STAMBPL1Q96FJ0 436 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 FMR1Q06787 632 aaKnown RBP eCLIP18.94■□□□□ 0.62
COL5A3-201ENST00000264828 SPDYAQ5MJ70 313 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 TRIM72Q6ZMU5 477 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 FRMD5Q7Z6J6 570 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 PLEKHG2Q9H7P9 1386 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 SETBP1Q9Y6X0 1596 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 PLD3Q8IV08 490 aa18.94■□□□□ 0.62
COL5A3-201ENST00000264828 GNAT1P11488 350 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 ATP2C1P98194 919 aaPredicted RBP18.93■□□□□ 0.62
COL5A3-201ENST00000264828 KIZQ2M2Z5 673 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 ABHD8Q96I13 439 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 C2orf40Q9H1Z8 148 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 H0Y626 953 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 EIF3HO15372 352 aaKnown RBP eCLIP18.93■□□□□ 0.62
COL5A3-201ENST00000264828 TRIM16O95361 564 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 PSMC5P62195 406 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 URGCPQ8TCY9 931 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 SPATA33Q96N06 139 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 WRNIP1Q96S55 665 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 STXBP3O00186 592 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 SFNP31947 248 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 SERPINB10P48595 397 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 ACTR2P61160 394 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 CLEC4FQ8N1N0 589 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 MYO3BQ8WXR4 1341 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 BTBD8Q5XKL5 378 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 TTC23LQ6PF05 361 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 CELF1Q92879 486 aaKnown RBP18.93■□□□□ 0.62
COL5A3-201ENST00000264828 SEC16BQ96JE7 1060 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 PLEKHA5Q9HAU0 1116 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 APRTP07741 180 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 UBTFL6P0CB48 400 aaPredicted RBP18.93■□□□□ 0.62
COL5A3-201ENST00000264828 INPP5DQ92835 1189 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 SH3GL3Q99963 347 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 FBXO2Q9UK22 296 aaPredicted RBP18.93■□□□□ 0.62
COL5A3-201ENST00000264828 PCDHGB4Q9UN71 923 aa18.93■□□□□ 0.62
COL5A3-201ENST00000264828 MROH7-TTC4A0A0A0MT08 1334 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 TLR2O60603 784 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 HMOX2P30519 316 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 C9orf72Q96LT7 481 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 THTPAQ9BU02 230 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 TRIM54Q9BYV2 358 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 TMEM117Q9H0C3 514 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 KDM4CQ9H3R0 1056 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 PNMA3Q9UL41 463 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 USP15Q9Y4E8 981 aaPredicted RBP18.92■□□□□ 0.62
COL5A3-201ENST00000264828 DGKIO75912 1065 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 RGS7P49802 495 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 TPI1P60174 286 aa18.92■□□□□ 0.62
COL5A3-201ENST00000264828 CCDC92Q53HC0 331 aaPredicted RBP18.92■□□□□ 0.62
COL5A3-201ENST00000264828 WDR19Q8NEZ3 1342 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms