RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 USP17L6PQ6QN14 398 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 RBM44Q6ZP01 1051 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 DPP9Q86TI2 863 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 TMEM87BQ96K49 555 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 ZNF668Q96K58 619 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 SNX24Q9Y343 169 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 HBS1LQ9Y450 684 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 TELO2Q9Y4R8 837 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 LRRC42Q9Y546 428 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 TTLL1O95922 423 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 HARSP12081 509 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 GFAPP14136 432 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 KRT15P19012 456 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 HSPA9P38646 679 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 CYP4A11Q02928 519 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 ZC2HC1CQ53FD0 456 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 TCP11X2Q5H9J9 407 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 DACT2Q5SW24 774 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 SLC2A7Q6PXP3 512 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 RGS9BPQ6ZS82 235 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 FAM13CQ8NE31 585 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 C6orf50Q9HD87 102 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 TRNAU1APQ9NX07 287 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 SSX2IPQ9Y2D8 614 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 ATP11BQ9Y2G3 1177 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 COL14A1Q05707 1796 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 SPDYE16A6NNV3 312 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 USP17L10C9JJH3 530 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 MGEA5O60502 916 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 ZBED4O75132 1171 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 BRAFP15056 766 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 HOXA10P31260 410 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 IFI35P80217 286 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 SLC34A1Q06495 639 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 KCNMA1Q12791 1236 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 GJC2Q5T442 439 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 TMC5Q6UXY8 1006 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 PRR23CQ6ZRP0 262 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 SRRM1Q8IYB3 904 aaKnown RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 ENAHQ8N8S7 591 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 MKNK1Q9BUB5 465 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 TBC1D10AQ9BXI6 508 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 ASCC2Q9H1I8 757 aaPredicted RBP8.87□□□□□ -0.99
LDB3-201ENST00000263066 HSD3B7Q9H2F3 369 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 Q9H521 79 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 KANSL2Q9H9L4 492 aa8.87□□□□□ -0.99
LDB3-201ENST00000263066 CAPN1P07384 714 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 ASNSP08243 561 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 BMP3P12645 472 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SMUG1Q53HV7 270 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 ARHGEF18Q6ZSZ5 1173 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 VPS36Q86VN1 386 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 NUDCD3Q8IVD9 361 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 MB21D1Q8N884 522 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 ASAP3Q8TDY4 903 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 GIMAP4Q9NUV9 329 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 A0A1B0GUL6 1792 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 TMEM120BA0PK00 339 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SPDYE2BA6NHP3 402 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 NOTOA8MTQ0 251 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 KIF28PB7ZC32 967 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 ADCY6O43306 1168 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 PPP6R2O75170 966 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SPDYE6P0CI01 402 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 ZNF18P17022 549 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 TKTP29401 623 aaKnown RBP8.86□□□□□ -0.99
LDB3-201ENST00000263066 INHBCP55103 352 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 AP2B1P63010 937 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 RESP18Q5W5W9 173 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SATL1Q86VE3 508 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 VGLL2Q8N8G2 317 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SLC43A3Q8NBI5 491 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SUN5Q8TC36 379 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 TUBGCP2Q9BSJ2 902 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 GRIP2Q9C0E4 1043 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 NRDE2Q9H7Z3 1164 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 DDX56Q9NY93 547 aaKnown RBP8.86□□□□□ -0.99
LDB3-201ENST00000263066 ABCC6O95255 1503 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 PGRMC1O00264 195 aaKnown RBP8.86□□□□□ -0.99
LDB3-201ENST00000263066 RGL2O15211 777 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 UNC5CO95185 931 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 PGM1P36871 562 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 PSMD6Q15008 389 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 PRR16Q569H4 304 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 IYDQ6PHW0 289 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 ZBTB46Q86UZ6 589 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 GALNT4Q8N4A0 578 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SCAIQ8N9R8 606 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 PPP1R13LQ8WUF5 828 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SRPK1Q96SB4 655 aaKnown RBP8.86□□□□□ -0.99
LDB3-201ENST00000263066 MRPL1Q9BYD6 325 aaKnown RBP8.86□□□□□ -0.99
LDB3-201ENST00000263066 SLC7A5P2Q9GIP4 190 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 THAP9Q9H5L6 903 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 NDUFA13Q9P0J0 144 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 SLC12A6Q9UHW9 1150 aa8.86□□□□□ -0.99
LDB3-201ENST00000263066 CPA2P48052 419 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 ITIH3Q06033 890 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 WASHC5Q12768 1159 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 LLGL1Q15334 1064 aa8.85□□□□□ -0.99
LDB3-201ENST00000263066 C12orf60Q5U649 245 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms