RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 TMOD4Q9NZQ9 345 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 ADAM22Q9P0K1 906 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 PRKAG3Q9UGI9 489 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 PCYOX1Q9UHG3 505 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 KCNG1Q9UIX4 513 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 ADAMTS5Q9UNA0 930 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 GJA3Q9Y6H8 435 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 PHIPQ8WWQ0 1821 aa11.56□□□□□ -0.56
CHRNA1-201ENST00000261007 RIPK2O43353 540 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 EXOC3O60645 756 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 PHF2O75151 1096 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 GGPS1O95749 300 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 KRT16P08779 473 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 YWHABP31946 246 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 DSG3P32926 999 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 INHBEP58166 350 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 MAP2K1Q02750 393 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 KCNA1Q09470 495 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 BFSP1Q12934 665 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 COG2Q14746 738 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 RBBP5Q15291 538 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 ZC2HC1CQ53FD0 456 aaPredicted RBP11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 RNF43Q68DV7 783 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 SLC30A10Q6XR72 485 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 OTUD6AQ7L8S5 288 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 ERICH1Q86X53 443 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 FBXO25Q8TCJ0 367 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 NSUN6Q8TEA1 469 aaKnown RBP11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 ATP6V0A1Q93050 837 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 WRNIP1Q96S55 665 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 STK33Q9BYT3 514 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 SIX2Q9NPC8 291 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 HOMER2Q9NSB8 354 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 ZFATQ9P243 1243 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 CTNNAL1Q9UBT7 734 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 SNX24Q9Y343 169 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 NR2E1Q9Y466 385 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 LRRC42Q9Y546 428 aa11.55□□□□□ -0.56
CHRNA1-201ENST00000261007 PMM2O15305 246 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 ATP5HO75947 161 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 EGFRP00533 1210 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 MYCLP12524 364 aaPredicted RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 HADHBP55084 474 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 GTF2BQ00403 316 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 MYL7Q01449 175 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 BIRC2Q13490 618 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 ACVR2BQ13705 512 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 PARP6Q2NL67 630 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SUPT20HL1Q3ZLR7 823 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 DCAF12L1Q5VU92 463 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 CHADLQ6NUI6 762 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 NSMFQ6X4W1 530 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 TRMT10CQ7L0Y3 403 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SPATA21Q7Z572 469 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 EXOC3L1Q86VI1 746 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 VSIG10LQ86VR7 867 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 DAW1Q8N136 415 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SLC35G2Q8TBE7 412 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 U2AF1L4Q8WU68 220 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 GRAMD1AQ96CP6 724 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 ATG4CQ96DT6 458 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 NAF1Q96HR8 494 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SERPINB12Q96P63 405 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 NFASCO94856 1347 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 MIF4GDA9UHW6 222 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 H0YCG3 227 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 ZBTB39O15060 712 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SNUPNO95149 360 aaKnown RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 PECAM1P16284 738 aaPredicted RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SOX5P35711 763 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 CYP2J2P51589 502 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 ENPEPQ07075 957 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 TAF11Q15544 211 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 CYFIP1Q7L576 1253 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 REPS2Q8NFH8 660 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 CFAP61Q8NHU2 1237 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 DYDC1Q8WWB3 177 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 CKAP2Q8WWK9 683 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 TEX13BQ9BXU2 312 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SEMA4AQ9H3S1 761 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 HOXC10Q9NYD6 342 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 PCDHA10Q9Y5I2 948 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 ASTN2O75129 1339 aaPredicted RBP11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 SYNGAP1Q96PV0 1343 aa11.54□□□□□ -0.56
CHRNA1-201ENST00000261007 EME2A4GXA9 379 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 TCP11X1B4DZS4 312 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 NR3C2P08235 984 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 LINGO3P0C6S8 592 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 NEFHP12036 1026 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 GNAZP19086 355 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 CTNNA2P26232 953 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 IFNAR2P48551 515 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 NCKAP1LP55160 1127 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 MCCD1P59942 119 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 BAATQ14032 418 aaPredicted RBP11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 TCEAL1Q15170 157 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 PTPROQ16827 1216 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 GNPTABQ3T906 1256 aa11.53□□□□□ -0.56
CHRNA1-201ENST00000261007 ZNF568Q3ZCX4 644 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms