RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 LVRNQ6Q4G3 990 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 MAB21L3Q8N8X9 362 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.87■□□□□ 0.293e-31■■□□□ 14.5
SLC6A8-201ENST00000253122 ZNF483Q8TF39 744 aaPredicted RBP16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 C11orf70Q9BRQ4 267 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 ZNF577Q9BSK1 485 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 TBC1D10AQ9BXI6 508 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 G3BP2Q9UN86 482 aaKnown RBP16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 RPTORQ8N122 1335 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 NT5C2P49902 561 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 YWHAGP61981 247 aaKnown RBP eCLIP16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 RNF217Q8TC41 542 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 DNAJC18Q9H819 358 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 CHST7Q9NS84 486 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 C1orf112Q9NSG2 853 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 GINM1Q9NU53 330 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 ZBTB39O15060 712 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 TAL1P17542 331 aaPredicted RBP16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 CAV1Q03135 178 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 CUL3Q13618 768 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 DOK7Q18PE1 504 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 TTC27Q6P3X3 843 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 DPH6Q7L8W6 267 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 RSAD2Q8WXG1 361 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 FAM20AQ96MK3 541 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 BCAS3Q9H6U6 928 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 C2CD2Q9Y426 696 aa16.87■□□□□ 0.29
SLC6A8-201ENST00000253122 KITP10721 976 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 PTDSS1P48651 473 aaKnown RBP16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 ARSHQ5FYA8 562 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 RINT1Q6NUQ1 792 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 TMEM117Q9H0C3 514 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 AGPAT3Q9NRZ7 376 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 ZDHHC18Q9NUE0 388 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 DDX60Q8IY21 1712 aaKnown RBP16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 PFDN1O60925 122 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 PGM1P36871 562 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 VHLP40337 213 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 BLMHQ13867 455 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 PPP1R18Q6NYC8 613 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 ZDHHC24Q6UX98 284 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 XXYLT1Q8NBI6 393 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 CYP2W1Q8TAV3 490 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 CPA5Q8WXQ8 436 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 POMGNT1Q8WZA1 660 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 SPOCK2Q92563 424 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 DCLRE1BQ9H816 532 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 LRP5O75197 1615 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 C4AP0C0L4 1744 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 RALAP11233 206 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 TM4SF1P30408 202 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 SERPINB6P35237 376 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 DRG2P55039 364 aaKnown RBP16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 IRX4P78413 519 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 RASA3Q14644 834 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 SPDYCQ5MJ68 293 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 CENPUQ71F23 418 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 ECHDC2Q86YB7 292 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 KAT5Q92993 513 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 MOV10L1Q9BXT6 1211 aaKnown RBP16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 NEU2Q9Y3R4 380 aa16.86■□□□□ 0.29
SLC6A8-201ENST00000253122 POLRMTO00411 1230 aaKnown RBP16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 PPEF1O14829 653 aaPredicted RBP16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 KRT1P04264 644 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 INHBAP08476 426 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 PEX5P50542 639 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 KDSRQ06136 332 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 SNX30Q5VWJ9 437 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 PRUNE1Q86TP1 453 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 ACCSQ96QU6 501 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 TCHPQ9BT92 498 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 COG5Q9UP83 839 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 CCDC22O60826 627 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 PIAS1O75925 651 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 BMP3P12645 472 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 ARSEP51690 589 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 SLC12A3P55017 1021 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 PEX3P56589 373 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 MAP7Q14244 749 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 MTFR1Q15390 333 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 UBAP2Q5T6F2 1119 aaKnown RBP16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 DCAF12L1Q5VU92 463 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 NINJ2Q9NZG7 142 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 ATP9AO75110 1047 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 ALDH1B1P30837 517 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 GPSM2P81274 684 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 THOC5Q13769 683 aaKnown RBP16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.85■□□□□ 0.296e-8■■■□□ 15.7
SLC6A8-201ENST00000253122 SMYD3Q9H7B4 428 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 ETAA1Q9NY74 926 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 SLC5A4Q9NY91 659 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 CYP39A1Q9NYL5 469 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 GRHL1Q9NZI5 618 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 HEY2Q9UBP5 337 aa16.85■□□□□ 0.29
SLC6A8-201ENST00000253122 CCDC189A1A4V9 331 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 KRT4P19013 534 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 VCAM1P19320 739 aa16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
SLC6A8-201ENST00000253122 LMNB2Q03252 620 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms