RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 PIDD1Q9HB75 910 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 CCDC78A2IDD5 438 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 C3orf70A6NLC5 250 aaPredicted RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 NEMP1O14524 444 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 RHOBTB3O94955 611 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 HSPA1AP0DMV8 641 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 HSPA1BP0DMV9 641 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 ATP1A3P13637 1013 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 MAP4P27816 1152 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 HDLBPQ00341 1268 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 SFSWAPQ12872 951 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 SNAPC2Q13487 334 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 TMEM132DQ14C87 1099 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 CCDC144BQ3MJ40 725 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 C16orf86Q6ZW13 317 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 PPM1NQ8N819 430 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 AIFM3Q96NN9 605 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 DHX35Q9H5Z1 703 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 TMEM51Q9NW97 253 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 CDV3Q9UKY7 258 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 PCDHGB4Q9UN71 923 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 RRN3P2A6NIE6 340 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 DFFAO00273 331 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 SRGNP10124 158 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 CDC25AP30304 524 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 STAT5BP51692 787 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 NEK2P51955 445 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 CEP55Q53EZ4 464 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 OXER1Q8TDS5 423 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 SH3KBP1Q96B97 665 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 PSMC3IPQ9P2W1 217 aaPredicted RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 A0A1B0GTH6 734 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 C16orf96A6NNT2 1141 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 PRPF4O43172 522 aaKnown RBP eCLIP7.6□□□□□ -1.19
CPS1-201ENST00000233072 SRP72O76094 671 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 PRDX5P30044 214 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 FBXW4P57775 412 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 DPYDQ12882 1025 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 NFX1Q12986 1120 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 NME3Q13232 169 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 MTA1Q13330 715 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 IER5Q5VY09 327 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 USP17L6PQ6QN14 398 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 CD302Q8IX05 232 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 TEX9Q8N6V9 391 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 C17orf75Q9HAS0 396 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 GIMAP4Q9NUV9 329 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 NDFIP2Q9NV92 336 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 ZNF609O15014 1411 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 EXTL3O43909 919 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 HOXC6P09630 235 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 BRAFP15056 766 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 ARSEP51690 589 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 CDH6P55285 790 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 EXOSC10Q01780 885 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 LRRC8BQ6P9F7 803 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 C16orf87Q6PH81 154 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 ZC3H18Q86VM9 953 aaKnown RBP7.6□□□□□ -1.19
CPS1-201ENST00000233072 SPATA16Q9BXB7 569 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 HEMGNQ9BXL5 484 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 PAK5Q9P286 719 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 MAD2L2Q9UI95 211 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 ZNRF3Q9ULT6 936 aa7.6□□□□□ -1.19
CPS1-201ENST00000233072 RPSAP08865 295 aaKnown RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 HIST1H2AGP0C0S8 130 aaPredicted RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 CYP2C8P10632 490 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 HIST1H2ADP20671 130 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 GRIK1P39086 918 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 ST8SIA6P61647 398 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 ZNF543Q08ER8 600 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 BYSLQ13895 437 aaKnown RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 HIC1Q14526 733 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 SF3B3Q15393 1217 aaKnown RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 TTC39BQ5VTQ0 682 aaPredicted RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 CYFIP1Q7L576 1253 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 PARP9Q8IXQ6 854 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 AGGF1Q8N302 714 aaeCLIP7.59□□□□□ -1.19
CPS1-201ENST00000233072 STAG2Q8N3U4 1231 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 USP13Q92995 863 aaPredicted RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 RNF25Q96BH1 459 aaPredicted RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 SAAL1Q96ER3 474 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 HIST1H2AHQ96KK5 128 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 RIT2Q99578 217 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 HIST1H2AJQ99878 128 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 SH3GL3Q99963 347 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 H2AFJQ9BTM1 129 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 CD163L1Q9NR16 1453 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 ANGPT2O15123 496 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 DNAJC6O75061 913 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 KLHL2O95198 593 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 FXR2P51116 673 aaKnown RBP eCLIP7.59□□□□□ -1.193e-6■■■□□ 18.4
CPS1-201ENST00000233072 RAP1GDS1P52306 607 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 COG2Q14746 738 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 EMC2Q15006 297 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 PDK1Q15118 436 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 SLC18A3Q16572 532 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 NFRKBQ6P4R8 1299 aa7.59□□□□□ -1.19
CPS1-201ENST00000233072 APLFQ8IW19 511 aaPredicted RBP7.59□□□□□ -1.19
CPS1-201ENST00000233072 MFN1Q8IWA4 741 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms