RNA–Protein interactions for RNA: ENSMUST00000209979.1

Ptpre-204, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Ptpre, Length 4,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-204ENSMUST00000209979 Pcdhb9E9Q5G2 828 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Vmn2r71L7N2D8 855 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rrm2P11157 390 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pik3r1P26450 724 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 RxrgP28705 463 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Krt86P97861 486 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm156Q58A37 223 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cyp7b1Q60991 507 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Hsph1Q61699 858 aaKnown RBP9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 PhgdhQ61753 533 aaKnown RBP9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Arid3aQ62431 601 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Osbpl6Q8BXR9 959 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ddah1Q9CWS0 285 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rassf7Q9DD19 359 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cyp4f14Q9EP75 524 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Trpc4Q9QUQ5 974 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Kdm6aO70546 1401 aa9.55□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Lrrc63A6H694 637 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Slc35g2D3YVE8 412 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 D830030K20RikE9PYQ5 218 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cyp4f40G3UW81 524 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ifi206G3UZV2 921 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm3043K7N693 218 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 C2P21180 760 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 SarsP26638 512 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 TfamP40630 243 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Map4k1P70218 827 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Galnt3P70419 633 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Fam193bQ3U2K0 892 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm4952Q5FW57 296 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 XiapQ60989 496 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Chi3l1Q61362 389 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ddr2Q62371 854 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Znf513Q6PD29 541 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Fam185aQ7TPD2 378 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rft1Q8C3B8 541 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Znf426Q8R1D1 550 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Msi2Q920Q6 346 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ivns1abpQ920Q8 642 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Trim54Q9ERP3 366 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pitpnm2Q6ZPQ6 1335 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Klhl18A0A0G2JGN5 579 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Dthd1E9PZX1 795 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cyp4f17G3UW78 524 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rtn2O70622 471 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Wee1P47810 646 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Teddm2Q208S0 260 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 SpoplQ2M2N2 392 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Mettl25Q6NXH8 597 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Dnajc28Q8VCE1 385 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Epsti1Q8VDI1 314 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Mrpl50Q8VDT9 159 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cyp4f16Q99N17 524 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Drap1Q9D6N5 205 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cse1lQ9ERK4 971 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Racgap1Q9WVM1 628 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Kdm3bQ6ZPY7 1562 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm13023A2A8N2 498 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Zfp846G3X996 541 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Eif4a1P60843 406 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cul4aQ3TCH7 759 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ccdc69Q3TCJ8 202 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ccdc51Q3URS9 406 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ppp4r3cQ3V0Y1 813 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 ThrspQ62264 150 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Fnip1Q68FD7 1165 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 GnptabQ69ZN6 1235 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Rexo4Q6PAQ4 432 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Fam180aQ8BR21 173 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gucy1b2Q8BXH3 824 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pm20d1Q8C165 503 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 ItchQ8C863 864 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pcdh18Q8VHR0 1134 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Chn1Q91V57 459 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Pcdha5Q91Y15 934 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Tnfaip8Q921Z5 198 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 CygbQ9CX80 190 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Cd2apQ9JLQ0 637 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Dlc1Q9R0Z9 1092 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm21488A0A087WR99 222 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ttc38A3KMP2 465 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Gm4340L7N2C4 268 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 GpiP06745 558 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Zfy2P20662 777 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ccnd2P30280 289 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Fdx1P46656 188 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 AdssP46664 456 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ccng1P51945 294 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 RalgdsQ03385 852 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Nsun7Q14AW5 724 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Edem3Q2HXL6 931 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Nr1h2Q60644 446 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Plk4Q64702 925 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Nup93Q8BJ71 819 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Arhgap22Q8BL80 702 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Vps50Q8CI71 964 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Dis3l2Q8CI75 870 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Stn1Q8K2X3 378 aa9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Ccdc59Q8R2N0 240 aaKnown RBP9.54□□□□□ -0.88
Ptpre-204ENSMUST00000209979 Klhl25Q8R2P1 589 aa9.54□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 16.1 ms