RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Trim68Q8K243 485 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rbm12Q8R4X3 992 aaKnown RBP7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tmprss4Q8VCA5 435 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 BrdtQ91Y44 956 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Q922R1 422 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Chst7Q9EP78 484 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gbp2Q9Z0E6 589 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Atp6v0a1Q9Z1G4 839 aaKnown RBP7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm28036V9GXJ1 658 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Dock3Q8CIQ7 2027 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm28510A0A087WP28 240 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Fam124aD3Z5V4 536 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Barx2O08686 283 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Brcc3P46737 291 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Pcsk1P63239 753 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Irx2P81066 474 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Nt5c2Q3V1L4 560 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Slc2a12Q8BFW9 622 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Neto2Q8BNJ6 525 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Polr2bQ8CFI7 1174 aaKnown RBP7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 OgtQ8CGY8 1046 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gnl3Q8CI11 538 aaKnown RBP7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 AdigQ8R400 80 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Slc12a9Q99MR3 914 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Luc7lQ9CYI4 371 aaKnown RBP7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Q9D1F3 157 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rnf186Q9D241 226 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Q9D9D9 101 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tlr2Q9QUN7 784 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Egfl7Q9QXT5 275 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Herc3A6H6S0 1050 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm4307E9PZY4 289 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm4312K9J7E2 289 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Itgb3O54890 787 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tspyl1O88852 379 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Pik3caP42337 1068 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Psg29Q3URN6 468 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Drc1Q3USS3 753 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Rhox12Q4TU81 186 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Olfr389Q7TRX7 312 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tmem202Q80W35 275 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Lamtor4Q8CF66 99 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Smg9Q9DB90 520 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Bcorl1A2AQH4 1781 aa7.39□□□□□ -1.23
Bdnf-201ENSMUST00000053317 VegfaQ00731 214 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Sox8Q04886 464 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Zc3h18Q0P678 948 aaKnown RBP7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Skap1Q3UUV5 355 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Znf827Q505G8 1078 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cntn2Q61330 1040 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cd300aQ6SJQ0 318 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Klhl11Q8CE33 709 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ddah1Q9CWS0 285 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gtf3c6Q9D8P7 227 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Dnajc12Q9R022 198 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cacna1bO55017 2327 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tanc1Q0VGY8 1856 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Dnah12Q3V0Q1 3086 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Serpinb3aG3X9V8 387 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Zfp408H7BX78 710 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm8298J3QPI0 401 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Oas1fQ14AZ4 364 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 TchpQ3TVW5 497 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Ccdc114Q3UX62 658 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Krt15Q61414 452 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Has1Q61647 583 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Krt31Q61765 416 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Sorbs1Q62417 1290 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Krt39Q6IFX4 482 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Retreg2Q6NS82 541 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Arhgap10Q6Y5D8 786 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Olfr1415Q7TQS4 311 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Sdad1Q80UZ2 687 aaKnown RBP7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tor4aQ8BH02 426 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Golph3lQ8R088 285 aaKnown RBP7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Olfr1416Q8VGU4 312 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 4933428M09RikQ9D3X3 192 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Mgea5Q9EQQ9 916 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 H2-OaQ9QWV1 250 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tnfrsf10bQ9QZM4 381 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Znf568E9PYI1 671 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gm21973F6WEZ7 68 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 4930544D05RikJ3QK56 214 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Pip4k2aO70172 405 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 JchainP01592 159 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Prl2c3P04768 224 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Zfp781Q0P5U5 243 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 AlcamQ61490 583 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cyp3a11Q64459 504 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Mbtd1Q6P5G3 631 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Polr2eQ80UW8 210 aaKnown RBP7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Cfap100Q80VN0 613 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Wscd1Q80XH4 572 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Usp38Q8BW70 1042 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Slc7a14Q8BXR1 771 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Thap2Q9D305 217 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Dnajb4Q9D832 337 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Stk11Q9WTK7 436 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Tnni1Q9WUZ5 187 aa7.38□□□□□ -1.23
Bdnf-201ENSMUST00000053317 Gys1Q9Z1E4 738 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 31.1 ms