RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Usp32F8VPZ3 1604 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Prl3b1P09586 222 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Slc12a1P55014 1095 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Map4k1P70218 827 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Trmt10cQ3UFY8 414 aaKnown RBP13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Spdye4aQ5IBH6 268 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 UrgcpQ5NCI0 926 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Q80Y73 168 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 N4bp3Q8C7U1 537 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Tbc1d10cQ8C9V1 444 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Stard7Q8R1R3 373 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Fgd4Q91ZT5 766 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Dbn1Q9QXS6 706 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Gabbr1Q9WV18 960 aa13.18□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Abcb1bP06795 1276 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Lzts1P60853 599 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Q3TQQ9 903 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ccdc85aQ5SP85 500 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ccdc50Q810U5 305 aaKnown RBP13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 C8aQ8K182 587 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Oxnad1Q8VE38 311 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Mtfr1lQ9CWE0 289 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 IscuQ9D7P6 168 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Slc2a5Q9WV38 501 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Shcbp1Q9Z179 668 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Akr1b10G5E895 316 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Eif3dO70194 548 aaKnown RBP13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 PkmP52480 531 aaKnown RBP13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 PhexP70669 749 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Rnf10Q3UIW5 804 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 FntaQ61239 377 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ptk6Q64434 451 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ireb2Q811J3 963 aaKnown RBP13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Best2Q8BGM5 508 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 HibchQ8QZS1 385 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 NenfQ9CQ45 171 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Nsmce1Q9D720 266 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Morf4l2Q9R0Q4 288 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Apol7bB1AQP7 369 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Usp4P35123 962 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Actr2P61161 394 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Apol7eQ3UZ24 369 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Samhd1Q60710 627 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Tmem39bQ810L4 492 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Trmt2aQ8BNV1 574 aaKnown RBP13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Mmtag2Q99LX5 260 aaKnown RBP13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Stk4Q9JI11 487 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Slc6a16A0A1L1SR47 742 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Card9A2AIV8 536 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Vmn2r121A2BE32 847 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 SelenovD3YXG1 328 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 PrkcbP68404 671 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ica1lQ3TY65 431 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ppp1r12bQ8BG95 976 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Rd3Q8BRE0 195 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Agap1Q8BXK8 857 aaKnown RBP13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Cdk17Q8K0D0 523 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 AagabQ8R2R3 316 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 MlphQ91V27 590 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Hdac11Q91WA3 347 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 ToporslQ9D2F8 683 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Atp11cQ9QZW0 1129 aa13.17□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Usp17lbE9Q9U0 468 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Gm10250G3X9L6 160 aaKnown RBP13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Rit2P70425 217 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Wdr36Q3TAQ9 899 aaKnown RBP13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Spag6Q3V0U9 509 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Armcx2Q6A058 784 aaKnown RBP13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Igf2bp3Q9CPN8 579 aaKnown RBP13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Atp5hQ9DCX2 161 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Fam205aA2APU8 1308 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ccdc194A0A140LIT1 234 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Rfx8D3YU81 596 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Prl2c2P04095 224 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Pstpip1P97814 415 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Edem3Q2HXL6 931 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Otud5Q3U2S4 566 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ankrd34bQ3UUF8 508 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Srek1ip1Q4V9W2 153 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Ssxb5Q6XAS2 159 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 4932411N23RikQ8C0S0 470 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 CenpuQ8C4M7 410 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Pglyrp2Q8VCS0 530 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Atp6v1b1Q91YH6 513 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Stk32bQ9JJX8 414 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Osbpl7A2A716 963 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Nptx2O70340 429 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 CnpP16330 420 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Rasa2P58069 847 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 YdjcQ14BV6 310 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Gsdmc4Q3TR54 480 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Gtpbp6Q3U6U5 514 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Krt35Q497I4 455 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Tdrd5Q5VCS6 1040 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 ThrspQ62264 150 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Galnt5Q8C102 930 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Unc45bQ8CGY6 931 aaKnown RBP13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Dusp19Q8K4T5 220 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Slf1Q8R3P9 1054 aa13.16□□□□□ -0.3
Sdf4-201ENSMUST00000050078 Upb1Q8VC97 393 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 38.5 ms