RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Cdo1P60334 200 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 SpertQ32MG2 446 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cabs1Q8C633 391 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nol6Q8R5K4 1152 aaKnown RBP12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Dqx1Q924H9 718 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tlcd1Q99JT6 247 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 M1apQ9Z0E1 529 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ccdc24E9PUW8 296 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Hoxa11P31311 313 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 SpoplQ2M2N2 392 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Foxred2Q3USW5 665 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Actr5Q80US4 605 aaKnown RBP12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 OgtQ8CGY8 1046 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Olfr805Q8VFI4 319 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Iqcf1Q9D9K8 182 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Plod3Q9R0E1 741 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 E230025N22RikG5E8S3 482 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 ZfxP17012 799 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Git1Q68FF6 770 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Bank1Q80VH0 783 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tcaf1Q8BNE1 924 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tmem145Q8C4U2 746 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mtmr6Q8VE11 617 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pde6cQ91ZQ1 861 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 NfkbizQ9EST8 728 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Fbxo16Q9QZM9 334 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cyp2b10P12791 500 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ccnd2P30280 289 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Uchl4P58321 233 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Sult1d1Q3UZZ6 295 aa12.57□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Arhgap42B2RQE8 841 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cbx2P30658 519 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 PkmP52480 531 aaKnown RBP12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 RalaP63321 206 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Krt86P97861 486 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mettl17Q3U2U7 461 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Shc3Q61120 474 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Znf148Q61624 794 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rtn3Q9ES97 964 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gm13103Q4VAD2 491 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Caprin1Q60865 707 aaKnown RBP12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Cdkn2aipQ8BI72 563 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pde10aQ8CA95 790 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Kremen1Q99N43 473 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Trpc4Q9QUQ5 974 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Tet3Q8BG87 1668 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mucl2P02815 138 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Serpinb2P12388 415 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ass1P16460 412 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gnl1P36916 607 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Meis2P97367 477 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mgat3Q10470 538 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Chtf18Q8BIW9 969 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 L3mbtl3Q8BLB7 883 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Fam43aQ8BUP8 424 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Kcnv1Q8BZN2 503 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 UvragQ8K245 698 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rtfdc1Q99K95 307 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Snf8Q9CZ28 258 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Dach1Q9QYB2 751 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gm16430A6X8J1 155 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Skint3A7TZF0 458 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Serpini1O35684 410 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 9130409I23RikQ3TS87 320 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 PapolaQ61183 739 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Moxd2Q7TT41 619 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Wdr35Q8BND3 1181 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Mettl1Q9Z120 268 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Scgb2b18A0A087WPA9 112 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Kpna6O35345 536 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Irf6P97431 467 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 LbpQ61805 481 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Trim62Q80V85 475 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gga3Q8BMI3 718 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Apol9bQ8C7I4 310 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Apol9aQ8VDU3 310 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 1700013H16RikQ9DAC5 291 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Olig1Q9JKN5 260 aa12.56□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Nedd9O35177 833 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 AlbP07724 608 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 VdrP48281 422 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Meis3P97368 378 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 EregQ61521 162 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 EsrrbQ61539 433 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Zcchc2Q69ZB8 1166 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ankrd49Q8VE42 238 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 1700123K08RikQ9D991 295 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Dnajc7Q9QYI3 494 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Myh1Q5SX40 1942 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gli3Q61602 1583 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rhox3fA2ANE1 215 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Pou5f1P20263 352 aaKnown RBP12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Ifnar1P33896 590 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rtel1Q0VGM9 1203 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Rnf168Q80XJ2 565 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Grik4Q8BMF5 956 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Gtpbp10Q8K013 366 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 Fubp1Q91WJ8 651 aaKnown RBP12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 SyncQ9EPM5 470 aa12.55□□□□□ -0.4
Pcif1-201ENSMUST00000041643 CtsfQ9R013 462 aa12.55□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 25.1 ms