RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 NOP13P53883 403 aaKnown RBP RIP-Chip data-1.66□□□□□ -2.68not detected
snR38snR38 TMA23Q03525 211 aa-1.66□□□□□ -2.68
snR38snR38 YMR252CQ04814 134 aa-1.66□□□□□ -2.68
snR38snR38 SAM4Q08985 325 aaKnown RBP-1.66□□□□□ -2.68
snR38snR38 YPR064WQ12492 139 aa-1.66□□□□□ -2.68
snR38snR38 SMC6Q12749 1114 aa-1.66□□□□□ -2.68
snR38snR38 ODC2Q99297 307 aa-1.66□□□□□ -2.68
snR38snR38 SNF2P22082 1703 aa-1.66□□□□□ -2.68
snR38snR38 COS2P0CX12 379 aa-1.67□□□□□ -2.68
snR38snR38 COS3P0CX13 379 aa-1.67□□□□□ -2.68
snR38snR38 GRX2P17695 143 aaKnown RBP-1.67□□□□□ -2.68
snR38snR38 SEC22P22214 214 aa-1.67□□□□□ -2.68
snR38snR38 SUA5P32579 426 aa-1.67□□□□□ -2.68
snR38snR38 YBR209WP38311 105 aa-1.67□□□□□ -2.68
snR38snR38 KNH1P50112 268 aa-1.67□□□□□ -2.68
snR38snR38 YMR209CQ03648 457 aa-1.67□□□□□ -2.68
snR38snR38 RVB1Q03940 463 aaKnown RBP-1.67□□□□□ -2.68
snR38snR38 VBA1Q04301 562 aa-1.67□□□□□ -2.68
snR38snR38 COA3Q3E7B2 85 aa-1.67□□□□□ -2.68
snR38snR38 IZH4Q99393 312 aa-1.67□□□□□ -2.68
snR38snR38 STE3P06783 470 aa-1.68□□□□□ -2.68
snR38snR38 YLL053CP0CD98 152 aa-1.68□□□□□ -2.68
snR38snR38 THR4P16120 514 aaKnown RBP-1.68□□□□□ -2.68
snR38snR38 QRI5P32344 111 aa-1.68□□□□□ -2.68
snR38snR38 JEN1P36035 616 aa-1.68□□□□□ -2.68
snR38snR38 VPS24P36095 224 aaKnown RBP-1.68□□□□□ -2.68
snR38snR38 LAS1P36146 502 aaPredicted RBP-1.68□□□□□ -2.68
snR38snR38 YSW1P38280 609 aa-1.68□□□□□ -2.68
snR38snR38 YHL049CP38722 271 aa-1.68□□□□□ -2.68
snR38snR38 BTT1P40314 149 aaPredicted RBP-1.68□□□□□ -2.68
snR38snR38 GAS3Q03655 524 aa-1.68□□□□□ -2.68
snR38snR38 DPP1Q05521 289 aa-1.68□□□□□ -2.68
snR38snR38 EMP46Q12396 444 aa-1.68□□□□□ -2.68
snR38snR38 YFR032C-BQ8TGU2 87 aa-1.68□□□□□ -2.68
snR38snR38 RPS0AP32905 252 aaKnown RBP-1.69□□□□□ -2.68
snR38snR38 YIL089WP40500 205 aa-1.69□□□□□ -2.68
snR38snR38 VPS60Q03390 229 aa-1.69□□□□□ -2.68
snR38snR38 RNH1Q04740 348 aa-1.69□□□□□ -2.68
snR38snR38 YMR226CQ05016 267 aaKnown RBP-1.69□□□□□ -2.68
snR38snR38 YPR147CQ06522 304 aaKnown RBP-1.69□□□□□ -2.68
snR38snR38 ABP140Q08641 628 aaKnown RBP-1.69□□□□□ -2.68
snR38snR38 AI5_BETAQ9ZZX0 354 aa-1.69□□□□□ -2.68
snR38snR38 SPO13P23624 291 aa-1.7□□□□□ -2.68
snR38snR38 DAL80P26343 269 aa-1.7□□□□□ -2.68
snR38snR38 NFU1P32860 256 aa-1.7□□□□□ -2.68
snR38snR38 RPT5P33297 434 aaKnown RBP-1.7□□□□□ -2.68
snR38snR38 YET1P35723 206 aa-1.7□□□□□ -2.68
snR38snR38 YMR141CP40211 102 aa-1.7□□□□□ -2.68
snR38snR38 SDC1Q03323 175 aa-1.7□□□□□ -2.68
snR38snR38 UPS1Q05776 175 aa-1.7□□□□□ -2.68
snR38snR38 FYV12Q08559 129 aa-1.7□□□□□ -2.68
snR38snR38 YLR462WO13556 202 aa-1.71□□□□□ -2.68
snR38snR38 RPL4AP10664 362 aaKnown RBP-1.71□□□□□ -2.68
snR38snR38 FZO1P38297 855 aa-1.71□□□□□ -2.68
snR38snR38 APE4P38821 490 aa-1.71□□□□□ -2.68
snR38snR38 PRM9P39551 298 aa-1.71□□□□□ -2.68
snR38snR38 YEL075CP39972 122 aa-1.71□□□□□ -2.68
snR38snR38 YEL008WP40001 126 aa-1.71□□□□□ -2.68
snR38snR38 FIS1P40515 155 aa-1.71□□□□□ -2.68
snR38snR38 ZIM17P42844 174 aa-1.71□□□□□ -2.68
snR38snR38 YJR015WP47090 510 aa-1.71□□□□□ -2.68
snR38snR38 RPL4BP49626 362 aaKnown RBP-1.71□□□□□ -2.68
snR38snR38 TAF9Q05027 157 aa-1.71□□□□□ -2.68
snR38snR38 MSH5Q12175 901 aa-1.71□□□□□ -2.68
snR38snR38 YOR114WQ12219 294 aa-1.71□□□□□ -2.68
snR38snR38 YHR122WP38829 231 aa-1.72□□□□□ -2.68
snR38snR38 YRB2P40517 327 aa-1.72□□□□□ -2.68
snR38snR38 YGL185CP53100 379 aa-1.72□□□□□ -2.68
snR38snR38 ALG11P53954 548 aaKnown RBP-1.72□□□□□ -2.68
snR38snR38 FAR8Q05040 523 aa-1.72□□□□□ -2.68
snR38snR38 BUD21Q08492 214 aaPredicted RBP-1.72□□□□□ -2.68
snR38snR38 FIT2Q08906 153 aa-1.72□□□□□ -2.68
snR38snR38 YCT1Q12235 531 aa-1.72□□□□□ -2.68
snR38snR38 YPR011CQ12251 326 aa-1.72□□□□□ -2.68
snR38snR38 YOL013W-AP0C272 63 aaPredicted RBP-1.73□□□□□ -2.69
snR38snR38 YCR001WP25347 104 aa-1.73□□□□□ -2.69
snR38snR38 POF1P25576 258 aa-1.73□□□□□ -2.69
snR38snR38 EHD3P28817 500 aa-1.73□□□□□ -2.69
snR38snR38 YBR242WP38331 238 aa-1.73□□□□□ -2.69
snR38snR38 MPP10P47083 593 aaKnown RBP-1.73□□□□□ -2.69
snR38snR38 ATC1Q04005 294 aa-1.73□□□□□ -2.69
snR38snR38 SEN15Q04675 128 aa-1.73□□□□□ -2.69
snR38snR38 ATG39Q06159 398 aa-1.73□□□□□ -2.69
snR38snR38 YFH1Q07540 174 aa-1.73□□□□□ -2.69
snR38snR38 PGA3Q12746 312 aaKnown RBP-1.73□□□□□ -2.69
snR38snR38 BNI1P41832 1953 aa-1.73□□□□□ -2.69
snR38snR38 MDM35O60200 86 aa-1.74□□□□□ -2.69
snR38snR38 UBA1P22515 1024 aaKnown RBP-1.74□□□□□ -2.69
snR38snR38 ELP6Q04868 273 aa-1.74□□□□□ -2.69
snR38snR38 YBL008W-AQ3E821 79 aa-1.74□□□□□ -2.69
snR38snR38 YAL064W-BO13512 126 aa-1.75□□□□□ -2.69
snR38snR38 PET494P07390 489 aaPredicted RBP-1.75□□□□□ -2.69
snR38snR38 RPL31AP0C2H8 113 aaKnown RBP-1.75□□□□□ -2.69
snR38snR38 SNA3P14359 133 aa-1.75□□□□□ -2.69
snR38snR38 DBF2P22204 572 aa-1.75□□□□□ -2.69
snR38snR38 YER189WP40104 122 aa-1.75□□□□□ -2.69
snR38snR38 RMR1P53060 241 aa-1.75□□□□□ -2.69
snR38snR38 KAP114P53067 1004 aa-1.75□□□□□ -2.69
snR38snR38 GTR2P53290 341 aa-1.75□□□□□ -2.69
snR38snR38 YNL050CP53952 270 aa-1.75□□□□□ -2.69
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms