RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W SPC25P40014 221 aa2□□□□□ -2.09
SEC16YPL085W NSA1P53136 463 aaPredicted RBP2□□□□□ -2.09
SEC16YPL085W YGR026WP53217 278 aa2□□□□□ -2.09
SEC16YPL085W MSC1Q03104 513 aa2□□□□□ -2.09
SEC16YPL085W ERP1Q05359 219 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W FCF2Q12035 217 aaPredicted RBP2□□□□□ -2.09
SEC16YPL085W YLR050CQ12155 161 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W MDM32Q12171 622 aa2□□□□□ -2.09
SEC16YPL085W TY4B-HP0C2J7 1802 aa2□□□□□ -2.09
SEC16YPL085W TY4B-JP47024 1803 aa2□□□□□ -2.09
SEC16YPL085W HIP1P06775 603 aa2□□□□□ -2.09
SEC16YPL085W HMRA1P0CY11 126 aa2□□□□□ -2.09
SEC16YPL085W FEN2P25621 512 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W IDH1P28834 360 aaKnown RBP RIP-Chip data2□□□□□ -2.09not detected
SEC16YPL085W PPG1P32838 368 aa2□□□□□ -2.09
SEC16YPL085W NNK1P36003 928 aa2□□□□□ -2.09
SEC16YPL085W TUL1P36096 758 aa2□□□□□ -2.09
SEC16YPL085W AGE2P40529 298 aa2□□□□□ -2.09
SEC16YPL085W SBH2P52871 88 aa2□□□□□ -2.09
SEC16YPL085W UPS3Q04006 179 aa2□□□□□ -2.09
SEC16YPL085W MDM30Q05930 598 aa2□□□□□ -2.09
SEC16YPL085W PHO92Q06390 306 aa2□□□□□ -2.09
SEC16YPL085W YLR352WQ06479 807 aa2□□□□□ -2.09
SEC16YPL085W IZH2Q12442 317 aa2□□□□□ -2.09
SEC16YPL085W RPS22BQ3E7Y3 130 aaKnown RBP2□□□□□ -2.09
SEC16YPL085W YSF3P0C074 85 aaPredicted RBP1.99□□□□□ -2.09
SEC16YPL085W PRE4P30657 266 aa1.99□□□□□ -2.09
SEC16YPL085W YHR097CP38809 366 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W ERJ5P43613 295 aaPredicted RBP1.99□□□□□ -2.09
SEC16YPL085W MOG1P47123 218 aa1.99□□□□□ -2.09
SEC16YPL085W ATG4P53867 494 aa1.99□□□□□ -2.09
SEC16YPL085W DML1Q03652 475 aa1.99□□□□□ -2.09
SEC16YPL085W AGE1Q04412 482 aa1.99□□□□□ -2.09
SEC16YPL085W YGK3Q12222 375 aaPredicted RBP1.99□□□□□ -2.09
SEC16YPL085W TRP3P00937 484 aa1.99□□□□□ -2.09
SEC16YPL085W RPS21AP0C0V8 87 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W MKK1P32490 508 aa1.99□□□□□ -2.09
SEC16YPL085W CAB4P53332 305 aa1.99□□□□□ -2.09
SEC16YPL085W LSM7P53905 115 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W CRT10Q08226 957 aa1.99□□□□□ -2.09
SEC16YPL085W FRE7Q12333 620 aa1.99□□□□□ -2.09
SEC16YPL085W YDL007C-AQ2V2Q0 85 aa1.99□□□□□ -2.09
SEC16YPL085W RPS31P05759 152 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W RPS25BP0C0T4 108 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W UBI4P0CG63 381 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W RPL40AP0CH08 128 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W RPL40BP0CH09 128 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W IME1P21190 360 aa1.99□□□□□ -2.09
SEC16YPL085W PPH21P23594 369 aa1.99□□□□□ -2.09
SEC16YPL085W YBR184WP38299 523 aa1.99□□□□□ -2.09
SEC16YPL085W IRC18P47056 224 aa1.99□□□□□ -2.09
SEC16YPL085W DAM1P53267 343 aa1.99□□□□□ -2.09
SEC16YPL085W APS2Q00381 147 aa1.99□□□□□ -2.09
SEC16YPL085W ISU2Q12056 156 aa1.99□□□□□ -2.09
SEC16YPL085W RBD2Q12270 262 aa1.99□□□□□ -2.09
SEC16YPL085W SNF8Q12483 233 aa1.99□□□□□ -2.09
SEC16YPL085W RPS25AQ3E792 108 aaPredicted RBP1.99□□□□□ -2.09
SEC16YPL085W ALG7P07286 448 aa1.99□□□□□ -2.09
SEC16YPL085W PUP1P25043 261 aa1.99□□□□□ -2.09
SEC16YPL085W YGL015CP33199 130 aa1.99□□□□□ -2.09
SEC16YPL085W INM1P38710 295 aa1.99□□□□□ -2.09
SEC16YPL085W ASP1P38986 381 aaPredicted RBP1.99□□□□□ -2.09
SEC16YPL085W GCV3P39726 170 aaPredicted RBP1.99□□□□□ -2.09
SEC16YPL085W YJR141WP47172 347 aaPredicted RBP1.99□□□□□ -2.09
SEC16YPL085W TRM9P49957 279 aa1.99□□□□□ -2.09
SEC16YPL085W HST3P53687 447 aa1.99□□□□□ -2.09
SEC16YPL085W CPR8P53728 308 aa1.99□□□□□ -2.09
SEC16YPL085W RDI1Q12434 202 aa1.99□□□□□ -2.09
SEC16YPL085W YCR075W-AQ3E830 75 aa1.99□□□□□ -2.09
SEC16YPL085W RPL12AP0CX53 165 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W RPL12BP0CX54 165 aa1.99□□□□□ -2.09
SEC16YPL085W HXT2P23585 541 aa1.99□□□□□ -2.09
SEC16YPL085W IRS4P36115 615 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W MAP2P38174 421 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W SLM4P38247 162 aa1.99□□□□□ -2.09
SEC16YPL085W YHK8P38776 514 aa1.99□□□□□ -2.09
SEC16YPL085W PFS1P38872 237 aa1.99□□□□□ -2.09
SEC16YPL085W EMI2Q04409 500 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W RSC58Q07979 502 aa1.99□□□□□ -2.09
SEC16YPL085W POM33Q12164 279 aa1.99□□□□□ -2.09
SEC16YPL085W ATP14Q12349 124 aa1.99□□□□□ -2.09
SEC16YPL085W RIB2Q12362 591 aaKnown RBP1.99□□□□□ -2.09
SEC16YPL085W YLR149CQ99296 730 aa1.99□□□□□ -2.09
SEC16YPL085W HTL1Q9URQ5 78 aa1.99□□□□□ -2.09
SEC16YPL085W RPS23AP0CX29 145 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W RPS23BP0CX30 145 aa1.98□□□□□ -2.09
SEC16YPL085W SAM35P14693 329 aa1.98□□□□□ -2.09
SEC16YPL085W BAP3P41815 604 aa1.98□□□□□ -2.09
SEC16YPL085W OST3P48439 350 aa1.98□□□□□ -2.09
SEC16YPL085W RPL9BP51401 191 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W YGR066CP53242 292 aa1.98□□□□□ -2.09
SEC16YPL085W DIA1P54005 336 aa1.98□□□□□ -2.09
SEC16YPL085W YML096WQ04489 525 aa1.98□□□□□ -2.09
SEC16YPL085W YHC1Q05900 231 aaKnown RBP1.98□□□□□ -2.09
SEC16YPL085W PEX27Q08580 376 aa1.98□□□□□ -2.09
SEC16YPL085W MDM10P18409 493 aa1.98□□□□□ -2.09
SEC16YPL085W MET22P32179 357 aa1.98□□□□□ -2.09
SEC16YPL085W SIP1P32578 815 aa1.98□□□□□ -2.09
SEC16YPL085W STE14P32584 239 aa1.98□□□□□ -2.09
SEC16YPL085W RAD23P32628 398 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms