RNA–Protein interactions for RNA: YOR118W

RTC5, Transcript of Protein of unknown function, yeast

Gene RTC5, Length 1,704 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTC5	YOR118W	BNA7	Q04066	261 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	MRPL51	Q06090	140 aa	Predicted RBP	4.12	□□□□□ -1.75
RTC5	YOR118W	RDI1	Q12434	202 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	URA3	P03962	267 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	AAC1	P04710	309 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	CDC23	P16522	626 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	ACB1	P31787	87 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	SPT10	P35208	640 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	RRF1	P38771	230 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	YJL193W	P39542	402 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	YIL077C	P40508	320 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	YIL067C	P40514	678 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	RPS0B	P46654	252 aa	Known RBP	4.12	□□□□□ -1.75
RTC5	YOR118W	CCC1	P47818	322 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	UBC11	P52492	156 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	LCL3	P53153	274 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	YGR066C	P53242	292 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	YGR126W	P53274	230 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	PEX25	Q02969	394 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	YLR031W	Q07978	186 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	FRE3	Q08905	711 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	ATP14	Q12349	124 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	RTR2	Q12378	196 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	TRM13	Q12383	476 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	ATG31	Q12421	196 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	ODC2	Q99297	307 aa		4.12	□□□□□ -1.75
RTC5	YOR118W	TEL1	P38110	2787 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	CWH43	P25618	953 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	FEN2	P25621	512 aa	Known RBP	4.11	□□□□□ -1.75
RTC5	YOR118W	PMT2	P31382	759 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	TAF14	P35189	244 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	SRY1	P36007	326 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	COS9	P36034	407 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	CDS1	P38221	457 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	PIG2	P40187	538 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	YJL163C	P46996	555 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	JAC1	P53193	184 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	YNR071C	P53757	342 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	MOT3	P54785	490 aa	Known RBP	4.11	□□□□□ -1.75
RTC5	YOR118W	ATG21	Q02887	496 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	SCS7	Q03529	384 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	GIS1	Q03833	894 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	YDR102C	Q03864	110 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	DCR2	Q05924	578 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	YPR147C	Q06522	304 aa	Known RBP	4.11	□□□□□ -1.75
RTC5	YOR118W	IRC19	Q07843	230 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	FEX2	Q08991	375 aa		4.11	□□□□□ -1.75
RTC5	YOR118W	RTC5	Q12108	567 aa	Known RBP	4.11	□□□□□ -1.75
RTC5	YOR118W	ARG80	P07249	177 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	DSF1	P0CX08	502 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	YNR073C	P0CX09	502 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	SEN2	P16658	377 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	AIM17	P23180	465 aa	Known RBP	4.1	□□□□□ -1.75
RTC5	YOR118W	MEK1	P24719	497 aa	Predicted RBP	4.1	□□□□□ -1.75
RTC5	YOR118W	STE50	P25344	346 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	PET18	P25362	215 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	NAM9	P27929	486 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	SRP102	P36057	244 aa	Predicted RBP	4.1	□□□□□ -1.75
RTC5	YOR118W	SNX4	P47057	423 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	GPI14	P47088	403 aa	Known RBP	4.1	□□□□□ -1.75
RTC5	YOR118W	BXI1	P48558	297 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	YLR152C	P54072	576 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	DID2	P69771	204 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	TRS23	Q03784	219 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	CTS2	Q06350	511 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	MIM1	Q08176	113 aa		4.1	□□□□□ -1.75
RTC5	YOR118W	SYC1	Q08553	188 aa	Predicted RBP	4.1	□□□□□ -1.75
RTC5	YOR118W	TDH2	P00358	332 aa	Known RBP	4.09	□□□□□ -1.75
RTC5	YOR118W	COX1	P00401	534 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	PHO2	P07269	559 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	CHO1	P08456	276 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	MATALPHA1	P0CY06	175 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	HMLALPHA1	P0CY07	175 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	KRR1	P25586	316 aa	Predicted RBP	4.09	□□□□□ -1.75
RTC5	YOR118W	ARO4	P32449	370 aa	Known RBP	4.09	□□□□□ -1.75
RTC5	YOR118W	SUA5	P32579	426 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	YKL063C	P35725	167 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	SSH1	P38353	490 aa	Known RBP	4.09	□□□□□ -1.75
RTC5	YOR118W	YER010C	P40011	234 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	ATF1	P40353	525 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	ECM27	P47144	725 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	SLI1	P53304	468 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	INN1	P53901	409 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	APM1	Q00776	475 aa	Predicted RBP	4.09	□□□□□ -1.75
RTC5	YOR118W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RTC5	YOR118W	CTF19	Q02732	369 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	TRI1	Q05024	226 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	YLR456W	Q06199	204 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	YOR385W	Q08909	290 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	YRM1	Q12340	786 aa		4.09	□□□□□ -1.75
RTC5	YOR118W	PUT1	P09368	476 aa		4.09	□□□□□ -1.76
RTC5	YOR118W	SEC22	P22214	214 aa		4.09	□□□□□ -1.76
RTC5	YOR118W	YCR016W	P25617	290 aa	Known RBP	4.09	□□□□□ -1.76
RTC5	YOR118W	YCR061W	P25639	631 aa		4.09	□□□□□ -1.76
RTC5	YOR118W	MRP17	P28778	131 aa		4.09	□□□□□ -1.76
RTC5	YOR118W	EHD3	P28817	500 aa		4.09	□□□□□ -1.76
RTC5	YOR118W	FMT1	P32785	401 aa		4.09	□□□□□ -1.76
RTC5	YOR118W	WBP1	P33767	430 aa	Known RBP	4.09	□□□□□ -1.76
RTC5	YOR118W	SHM2	P37291	469 aa	Known RBP	4.09	□□□□□ -1.76
RTC5	YOR118W	SMB1	P40018	196 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms