RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SQS1	YNL224C	SPO12	P17123	173 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	ATG15	P25641	520 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	YKL187C	P34231	750 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	DRE2	P36152	348 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	YBR096W	P38256	230 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	YHR078W	P38799	552 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	YEA6	P39953	335 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	XBP1	P40489	647 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	HYR1	P40581	163 aa	Known RBP	2.99	□□□□□ -1.93
SQS1	YNL224C	GTS1	P40956	396 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	SAS2	P40963	338 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	SNM1	P40993	198 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	YJR012C	P47087	207 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	SAY1	P53324	424 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	SOK2	P53438	785 aa	Predicted RBP	2.99	□□□□□ -1.93
SQS1	YNL224C	YNL092W	P53934	400 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	NRG1	Q03125	231 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	PKR1	Q03880	122 aa	Known RBP	2.99	□□□□□ -1.93
SQS1	YNL224C	SAM4	Q08985	325 aa	Known RBP	2.99	□□□□□ -1.93
SQS1	YNL224C	RAD28	Q12021	506 aa		2.99	□□□□□ -1.93
SQS1	YNL224C	STU1	P38198	1513 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	SAM2	P19358	384 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	PDE1	P22434	369 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	TKL1	P23254	680 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	URK1	P27515	501 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	IES6	P32617	166 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	TKL2	P33315	681 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	NTF2	P33331	125 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	YHR035W	P38769	630 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	YHR130C	P38834	111 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	CEM1	P39525	442 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	SMX2	P40204	77 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	ARG2	P40360	574 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	LYS12	P40495	371 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	TAM41	P53230	385 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	MTM1	P53320	366 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	BIO4	P53630	237 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	MDM30	Q05930	598 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	SNT309	Q06091	175 aa	Predicted RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	EMG1	Q06287	252 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	GPI11	Q06636	219 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	CSI2	Q08054	341 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	AIM39	Q08223	395 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	FDH1	Q08911	376 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	ENV7	Q12003	364 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	YLR050C	Q12155	161 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	YDR215C	Q12240	137 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	DET1	Q99288	334 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	NTE1	Q04958	1679 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	RAD52	P06778	471 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	RPL31A	P0C2H8	113 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	RPL31B	P0C2H9	113 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	NOP1	P15646	327 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	ERD1	P16151	362 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	FEN2	P25621	512 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	EMP24	P32803	203 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	HIS7	P33734	552 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	YKL107W	P34251	309 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	YOR062C	P36025	268 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	AVT5	P38176	459 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	QDR3	P38227	689 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	DOG1	P38774	246 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	FSH1	P38777	243 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	YER189W	P40104	122 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	GAT2	P40209	560 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	MDM34	P53083	459 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	BUD32	P53323	261 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	LEE1	Q02799	301 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	ELC1	Q03071	99 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	NKP2	Q06162	153 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	TEN1	Q07921	160 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	YOR387C	Q08910	206 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	RLM1	Q12224	676 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	UTP23	Q12339	254 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	GEP5	Q12393	293 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	Q0142	Q9ZZW4	58 aa		2.98	□□□□□ -1.93
SQS1	YNL224C	RPO21	P04050	1733 aa	Known RBP	2.98	□□□□□ -1.93
SQS1	YNL224C	HIR3	P47171	1648 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	YLR415C	O13578	112 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	FCY2	P17064	533 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	POF1	P25576	258 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	SRB6	P32570	121 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	TOD6	P34219	525 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	EMC3	P36039	253 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	DAN1	P47178	298 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	MSB3	P48566	633 aa	Predicted RBP	2.97	□□□□□ -1.93
SQS1	YNL224C	VEL1	P53058	206 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	MMS2	P53152	137 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	YGR151C	P53287	111 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	AAH1	P53909	347 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	VPS28	Q02767	242 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	GRX5	Q02784	150 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	DOT1	Q04089	582 aa	Known RBP	2.97	□□□□□ -1.93
SQS1	YNL224C	ECI1	Q05871	280 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	STP3	Q05937	343 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	ERF2	Q06551	359 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	ISU2	Q12056	156 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	YCT1	Q12235	531 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	PRR2	Q12310	699 aa		2.97	□□□□□ -1.93
SQS1	YNL224C	PST1	Q12355	444 aa		2.97	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms