RNA–Protein interactions for RNA: YMR301C

ATM1, Transcript of Mitochondrial inner membrane ATP-binding cassette (ABC) transporter, yeast

Gene ATM1, Length 2,073 nt, Biotype protein coding, Subcellular localisation Mitochondria, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATM1	YMR301C	APL3	P38065	1025 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	VBA2	P38358	474 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	RTC3	P38804	111 aa	Predicted RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	LNP1	P38878	278 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	FLX1	P40464	311 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	FAR7	P43592	221 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	SSK1	Q07084	712 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	VIK1	Q12045	647 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	FRE8	Q12209	686 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	FSH3	Q99369	266 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	TDH1	P00360	332 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	RPS13	P05756	151 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	RPS5	P26783	225 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	APE2	P32454	952 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	RIO2	P40160	425 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	AGE2	P40529	298 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	DIM1	P41819	318 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	MTL1	P53214	551 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	ORM1	P53224	222 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	PGA1	P53896	198 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	OST6	Q03723	332 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	YMR226C	Q05016	267 aa	Known RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	MRPL51	Q06090	140 aa	Predicted RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	RXT3	Q07458	294 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	CSI2	Q08054	341 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	SYC1	Q08553	188 aa	Predicted RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	FRE5	Q08908	694 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	YOR289W	Q12012	251 aa	Predicted RBP	3.99	□□□□□ -1.77
ATM1	YMR301C	YLR122C	Q12312	125 aa		3.99	□□□□□ -1.77
ATM1	YMR301C	YER145C-A	A0A023PYF4	145 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YBR085C-A	O43137	85 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	SNF4	P12904	322 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	MSI1	P13712	422 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	MDH1	P17505	334 aa	Known RBP RIP-Chip data	3.98	□□□□□ -1.77	not detected
ATM1	YMR301C	YCR061W	P25639	631 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	GAR1	P28007	205 aa	Known RBP	3.98	□□□□□ -1.77
ATM1	YMR301C	MRPL6	P32904	214 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YBR096W	P38256	230 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	PHO90	P39535	881 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	AGP3	P43548	558 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	LOC1	P43586	204 aa	Predicted RBP	3.98	□□□□□ -1.77
ATM1	YMR301C	DUG3	P53871	357 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YML108W	Q03759	105 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YDR391C	Q04170	232 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	TPO3	Q06451	622 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	ARR3	Q06598	404 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	RRS1	Q08746	203 aa	Known RBP	3.98	□□□□□ -1.77
ATM1	YMR301C	RBD2	Q12270	262 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	MED4	Q12343	284 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	RPL39	P04650	51 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	RPL6B	P05739	176 aa	Known RBP	3.98	□□□□□ -1.77
ATM1	YMR301C	DSF1	P0CX08	502 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YNR073C	P0CX09	502 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	VMA11	P32842	164 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	RPC34	P32910	317 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	CLG1	P35190	452 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YKL063C	P35725	167 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	CTR2	P38865	189 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	RRG9	P40156	214 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YRB2	P40517	327 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	LOH1	P47055	219 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YNL046W	P53956	172 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YDR239C	Q03780	787 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	AIM36	Q03798	255 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	MSS11	Q03825	758 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	RRI1	Q12468	440 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	YCL048W-A	Q2V2Q2	79 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	CMC2	Q3E7A4	109 aa		3.98	□□□□□ -1.77
ATM1	YMR301C	CYC7	P00045	113 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	YKR015C	P36111	568 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	BNA6	P43619	295 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	SFH5	P47008	294 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	APJ1	P53940	528 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	ECM18	Q04623	453 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	MSA1	Q08471	629 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	YDR215C	Q12240	137 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	YLR108C	Q12259	485 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	YBR255C-A	Q3E776	120 aa		3.97	□□□□□ -1.77
ATM1	YMR301C	RPL15A	P05748	204 aa	Known RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	KIN28	P06242	306 aa		3.96	□□□□□ -1.77
ATM1	YMR301C	FUS3	P16892	353 aa	Known RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	DBF2	P22204	572 aa		3.96	□□□□□ -1.77
ATM1	YMR301C	MEK1	P24719	497 aa	Predicted RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	SRP102	P36057	244 aa	Predicted RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	DAD2	P36162	133 aa		3.96	□□□□□ -1.77
ATM1	YMR301C	POP7	P38291	140 aa		3.96	□□□□□ -1.77
ATM1	YMR301C	THO1	P40040	218 aa	Known RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	OST1	P41543	476 aa	Known RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	YHC3	P47040	408 aa		3.96	□□□□□ -1.77
ATM1	YMR301C	RPL15B	P54780	204 aa	Predicted RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	GMC1	Q04399	608 aa		3.96	□□□□□ -1.77
ATM1	YMR301C	YPL225W	Q08971	146 aa	Known RBP	3.96	□□□□□ -1.77
ATM1	YMR301C	MES1	P00958	751 aa	Known RBP	3.96	□□□□□ -1.78
ATM1	YMR301C	TPK3	P05986	398 aa		3.96	□□□□□ -1.78
ATM1	YMR301C	HIS3	P06633	220 aa		3.96	□□□□□ -1.78
ATM1	YMR301C	PDE2	P06776	526 aa		3.96	□□□□□ -1.78
ATM1	YMR301C	YML003W	P0CF16	290 aa		3.96	□□□□□ -1.78
ATM1	YMR301C	ARO3	P14843	370 aa	Known RBP	3.96	□□□□□ -1.78
ATM1	YMR301C	PHO80	P20052	293 aa		3.96	□□□□□ -1.78
ATM1	YMR301C	ATP3	P38077	311 aa	Known RBP	3.96	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms