RNA–Protein interactions for RNA: YMR298W

LIP1, Transcript of Ceramide synthase subunit, yeastyeast

Gene LIP1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LIP1YMR298W IDP2P41939 412 aa8.34□□□□□ -1.07
LIP1YMR298W ADO1P47143 340 aaKnown RBP8.34□□□□□ -1.07
LIP1YMR298W NIT3P49954 291 aa8.34□□□□□ -1.07
LIP1YMR298W YNL165WP53891 406 aa8.34□□□□□ -1.07
LIP1YMR298W YDR387CQ04162 555 aa8.34□□□□□ -1.07
LIP1YMR298W YNG1Q08465 219 aa8.34□□□□□ -1.07
LIP1YMR298W TRM13Q12383 476 aa8.34□□□□□ -1.07
LIP1YMR298W ISA2Q12425 185 aa8.34□□□□□ -1.07
LIP1YMR298W MES1P00958 751 aaKnown RBP8.33□□□□□ -1.08
LIP1YMR298W ARG80P07249 177 aa8.33□□□□□ -1.08
LIP1YMR298W MRP17P28778 131 aa8.33□□□□□ -1.08
LIP1YMR298W AFG1P32317 509 aa8.33□□□□□ -1.08
LIP1YMR298W MRPL27P36526 146 aaPredicted RBP8.33□□□□□ -1.08
LIP1YMR298W MGE1P38523 228 aa8.33□□□□□ -1.08
LIP1YMR298W YER137CP40083 148 aaKnown RBP8.33□□□□□ -1.08
LIP1YMR298W CIN2P46670 268 aa8.33□□□□□ -1.08
LIP1YMR298W CTK2P46962 323 aa8.33□□□□□ -1.08
LIP1YMR298W GTF1P53260 183 aaPredicted RBP8.33□□□□□ -1.08
LIP1YMR298W MRPL19P53875 158 aa8.33□□□□□ -1.08
LIP1YMR298W RNH201P53942 307 aa8.33□□□□□ -1.08
LIP1YMR298W ARG5,6Q01217 863 aa8.33□□□□□ -1.08
LIP1YMR298W YLR352WQ06479 807 aa8.33□□□□□ -1.08
LIP1YMR298W YOL024WQ08172 172 aa8.33□□□□□ -1.08
LIP1YMR298W RPS16AP0CX51 143 aaKnown RBP8.32□□□□□ -1.08
LIP1YMR298W RPS16BP0CX52 143 aaKnown RBP8.32□□□□□ -1.08
LIP1YMR298W PCL1P24867 279 aa8.32□□□□□ -1.08
LIP1YMR298W SED4P25365 1065 aa8.32□□□□□ -1.08
LIP1YMR298W PPZ2P33329 710 aa8.32□□□□□ -1.08
LIP1YMR298W YIL169CP40442 995 aa8.32□□□□□ -1.08
LIP1YMR298W YJL016WP47072 561 aa8.32□□□□□ -1.08
LIP1YMR298W SOK2P53438 785 aaPredicted RBP8.32□□□□□ -1.08
LIP1YMR298W HRI1Q05905 244 aaKnown RBP8.32□□□□□ -1.08
LIP1YMR298W MCT1Q12283 360 aa8.32□□□□□ -1.08
LIP1YMR298W COX5BP00425 151 aa8.31□□□□□ -1.08
LIP1YMR298W RFA3P26755 122 aaKnown RBP8.31□□□□□ -1.08
LIP1YMR298W VMA5P31412 392 aaKnown RBP8.31□□□□□ -1.08
LIP1YMR298W ACB1P31787 87 aa8.31□□□□□ -1.08
LIP1YMR298W ARO4P32449 370 aaKnown RBP8.31□□□□□ -1.08
LIP1YMR298W MTC7P32633 139 aa8.31□□□□□ -1.08
LIP1YMR298W YKL063CP35725 167 aa8.31□□□□□ -1.08
LIP1YMR298W KAE1P36132 386 aa8.31□□□□□ -1.08
LIP1YMR298W MRPL39P36533 70 aa8.31□□□□□ -1.08
LIP1YMR298W ECM27P47144 725 aa8.31□□□□□ -1.08
LIP1YMR298W YGL159WP53110 370 aa8.31□□□□□ -1.08
LIP1YMR298W TYW3P53177 273 aa8.31□□□□□ -1.08
LIP1YMR298W YNR048WP53740 393 aa8.31□□□□□ -1.08
LIP1YMR298W HHT1P61830 136 aa8.31□□□□□ -1.08
LIP1YMR298W COQ11Q05892 277 aa8.31□□□□□ -1.08
LIP1YMR298W YLR224WQ05947 369 aa8.31□□□□□ -1.08
LIP1YMR298W YDL180WQ12301 547 aa8.31□□□□□ -1.08
LIP1YMR298W RTR2Q12378 196 aa8.31□□□□□ -1.08
LIP1YMR298W PRM4Q12498 284 aa8.31□□□□□ -1.08
LIP1YMR298W SEC16P48415 2195 aaKnown RBP8.3□□□□□ -1.08
LIP1YMR298W TDH3P00359 332 aaKnown RBP RIP-Chip data8.3□□□□□ -1.08not detected
LIP1YMR298W PHO2P07269 559 aa8.3□□□□□ -1.08
LIP1YMR298W PUT1P09368 476 aa8.3□□□□□ -1.08
LIP1YMR298W HNM1P19807 563 aa8.3□□□□□ -1.08
LIP1YMR298W CPR4P25334 318 aa8.3□□□□□ -1.08
LIP1YMR298W SWM2P40342 146 aa8.3□□□□□ -1.08
LIP1YMR298W PHB2P50085 310 aa8.3□□□□□ -1.08
LIP1YMR298W AVT4P50944 713 aa8.3□□□□□ -1.08
LIP1YMR298W SMX3P54999 86 aaPredicted RBP8.3□□□□□ -1.08
LIP1YMR298W MRP51Q02950 344 aa8.3□□□□□ -1.08
LIP1YMR298W RRP15Q06511 250 aaPredicted RBP8.3□□□□□ -1.08
LIP1YMR298W DSF1P0CX08 502 aa8.29□□□□□ -1.08
LIP1YMR298W YNR073CP0CX09 502 aa8.29□□□□□ -1.08
LIP1YMR298W RPL30P14120 105 aaKnown RBP8.29□□□□□ -1.08
LIP1YMR298W CKS1P20486 150 aaKnown RBP8.29□□□□□ -1.08
LIP1YMR298W YCR016WP25617 290 aaKnown RBP8.29□□□□□ -1.08
LIP1YMR298W FMT1P32785 401 aa8.29□□□□□ -1.08
LIP1YMR298W YBL010CP32788 280 aa8.29□□□□□ -1.08
LIP1YMR298W PAN3P36102 679 aaPredicted RBP8.29□□□□□ -1.08
LIP1YMR298W MOH1P38191 138 aa8.29□□□□□ -1.08
LIP1YMR298W PHM8P40025 321 aa8.29□□□□□ -1.08
LIP1YMR298W SNX4P47057 423 aa8.29□□□□□ -1.08
LIP1YMR298W SKP1P52286 194 aa8.29□□□□□ -1.08
LIP1YMR298W TNA1P53322 534 aa8.29□□□□□ -1.08
LIP1YMR298W MRX9Q07349 420 aaKnown RBP8.29□□□□□ -1.08
LIP1YMR298W USB1Q12208 290 aaKnown RBP8.29□□□□□ -1.08
LIP1YMR298W IZH2Q12442 317 aa8.29□□□□□ -1.08
LIP1YMR298W PET20Q99373 253 aa8.29□□□□□ -1.08
LIP1YMR298W IFM1P25038 676 aa8.28□□□□□ -1.08
LIP1YMR298W RPS26AP39938 119 aaKnown RBP8.28□□□□□ -1.08
LIP1YMR298W RPS26BP39939 119 aaKnown RBP8.28□□□□□ -1.08
LIP1YMR298W QDR1P40475 563 aa8.28□□□□□ -1.08
LIP1YMR298W YGR210CP42942 411 aa8.28□□□□□ -1.08
LIP1YMR298W ACS2P52910 683 aaKnown RBP8.28□□□□□ -1.08
LIP1YMR298W ELA1P53861 379 aaPredicted RBP8.28□□□□□ -1.08
LIP1YMR298W LAP3Q01532 483 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
LIP1YMR298W PRM15Q03262 622 aa8.28□□□□□ -1.08
LIP1YMR298W YML018CQ03730 393 aa8.28□□□□□ -1.08
LIP1YMR298W YAP6Q03935 383 aa8.28□□□□□ -1.08
LIP1YMR298W THI72Q08579 599 aa8.28□□□□□ -1.08
LIP1YMR298W YPL278CQ08990 100 aa8.28□□□□□ -1.08
LIP1YMR298W ERP4Q12450 207 aa8.28□□□□□ -1.08
LIP1YMR298W YBR298C-AQ8TGK4 73 aa8.28□□□□□ -1.08
LIP1YMR298W AAC1P04710 309 aa8.27□□□□□ -1.09
LIP1YMR298W ARO9P38840 513 aaPredicted RBP8.27□□□□□ -1.09
LIP1YMR298W AIM46P38885 310 aa8.27□□□□□ -1.09
LIP1YMR298W MOB2P43563 287 aa8.27□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 59.3 ms