RNA–Protein interactions for RNA: YMR200W

ROT1, Transcript of Molecular chaperone involved in protein folding in ER, yeastyeast

Gene ROT1, Length 771 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROT1YMR200W COS6P53344 381 aa4.09□□□□□ -1.75
ROT1YMR200W TPS1Q00764 495 aaKnown RBP4.09□□□□□ -1.75
ROT1YMR200W SFM1Q12314 213 aa4.09□□□□□ -1.75
ROT1YMR200W CSR2Q12734 1121 aa4.09□□□□□ -1.75
ROT1YMR200W RPL42AP0CX27 106 aaKnown RBP4.08□□□□□ -1.76
ROT1YMR200W RPL42BP0CX28 106 aaKnown RBP4.08□□□□□ -1.76
ROT1YMR200W RPS18AP0CX55 146 aaKnown RBP4.08□□□□□ -1.76
ROT1YMR200W RPS18BP0CX56 146 aaPredicted RBP4.08□□□□□ -1.76
ROT1YMR200W MIR1P23641 311 aaKnown RBP4.08□□□□□ -1.76
ROT1YMR200W UBC8P28263 218 aa4.08□□□□□ -1.76
ROT1YMR200W SEC1P30619 724 aaKnown RBP4.08□□□□□ -1.76
ROT1YMR200W OAC1P32332 324 aa4.08□□□□□ -1.76
ROT1YMR200W CAT2P32796 670 aaKnown RBP4.08□□□□□ -1.76
ROT1YMR200W MRPL39P36533 70 aa4.08□□□□□ -1.76
ROT1YMR200W RCK1P38622 512 aa4.08□□□□□ -1.76
ROT1YMR200W KOG1P38873 1557 aa4.08□□□□□ -1.76
ROT1YMR200W DRS2P39524 1355 aa4.08□□□□□ -1.76
ROT1YMR200W BDH1P39714 382 aa4.08□□□□□ -1.76
ROT1YMR200W PDS1P40316 373 aaPredicted RBP4.08□□□□□ -1.76
ROT1YMR200W MAM33P40513 266 aa4.08□□□□□ -1.76
ROT1YMR200W COG5P53951 403 aa4.08□□□□□ -1.76
ROT1YMR200W GAS2Q06135 555 aa4.08□□□□□ -1.76
ROT1YMR200W LOA1Q06508 300 aa4.08□□□□□ -1.76
ROT1YMR200W YOL019WQ08157 551 aa4.08□□□□□ -1.76
ROT1YMR200W YOL024WQ08172 172 aa4.08□□□□□ -1.76
ROT1YMR200W RRP40Q08285 240 aaKnown RBP4.08□□□□□ -1.76
ROT1YMR200W NDD1Q08887 554 aa4.08□□□□□ -1.76
ROT1YMR200W RDI1Q12434 202 aa4.08□□□□□ -1.76
ROT1YMR200W YMR316C-AI2HB70 103 aa4.07□□□□□ -1.76
ROT1YMR200W STE7P06784 515 aa4.07□□□□□ -1.76
ROT1YMR200W MRS1P07266 363 aa4.07□□□□□ -1.76
ROT1YMR200W FUN26P31381 517 aa4.07□□□□□ -1.76
ROT1YMR200W MIX23P38162 196 aa4.07□□□□□ -1.76
ROT1YMR200W SSH1P38353 490 aaKnown RBP4.07□□□□□ -1.76
ROT1YMR200W TPC1P53257 314 aa4.07□□□□□ -1.76
ROT1YMR200W AIM34Q03673 198 aa4.07□□□□□ -1.76
ROT1YMR200W DYN3Q04949 312 aa4.07□□□□□ -1.76
ROT1YMR200W RFU1Q08003 200 aa4.07□□□□□ -1.76
ROT1YMR200W PEX11Q12462 236 aa4.07□□□□□ -1.76
ROT1YMR200W YOR1P53049 1477 aa4.06□□□□□ -1.76
ROT1YMR200W COS2P0CX12 379 aa4.06□□□□□ -1.76
ROT1YMR200W COS3P0CX13 379 aa4.06□□□□□ -1.76
ROT1YMR200W GRX2P17695 143 aaKnown RBP4.06□□□□□ -1.76
ROT1YMR200W ATG15P25641 520 aa4.06□□□□□ -1.76
ROT1YMR200W URA10P30402 227 aa4.06□□□□□ -1.76
ROT1YMR200W TRS65P32893 560 aa4.06□□□□□ -1.76
ROT1YMR200W GPX1P36014 167 aa4.06□□□□□ -1.76
ROT1YMR200W NAT2P37293 288 aa4.06□□□□□ -1.76
ROT1YMR200W SHE3P38272 425 aaKnown RBP4.06□□□□□ -1.76
ROT1YMR200W YHL049CP38722 271 aa4.06□□□□□ -1.76
ROT1YMR200W CHL4P38907 458 aa4.06□□□□□ -1.76
ROT1YMR200W OXA1P39952 402 aa4.06□□□□□ -1.76
ROT1YMR200W MAK3Q03503 176 aa4.06□□□□□ -1.76
ROT1YMR200W FAR10Q06001 478 aa4.06□□□□□ -1.76
ROT1YMR200W YLR030WQ07967 263 aa4.06□□□□□ -1.76
ROT1YMR200W RPN8Q08723 338 aaKnown RBP4.06□□□□□ -1.76
ROT1YMR200W YPL245WQ12179 454 aaKnown RBP4.06□□□□□ -1.76
ROT1YMR200W HRT3Q12347 344 aa4.06□□□□□ -1.76
ROT1YMR200W HMS1Q12398 434 aa4.06□□□□□ -1.76
ROT1YMR200W TAF2P23255 1407 aa4.05□□□□□ -1.76
ROT1YMR200W CMD1P06787 147 aaKnown RBP4.05□□□□□ -1.76
ROT1YMR200W IDP1P21954 428 aaKnown RBP4.05□□□□□ -1.76
ROT1YMR200W CAM1P29547 415 aaKnown RBP4.05□□□□□ -1.76
ROT1YMR200W SPL2P38839 148 aa4.05□□□□□ -1.76
ROT1YMR200W HAC1P41546 238 aa4.05□□□□□ -1.76
ROT1YMR200W FMP32P43557 207 aa4.05□□□□□ -1.76
ROT1YMR200W MPA43P53583 542 aaPredicted RBP4.05□□□□□ -1.76
ROT1YMR200W DSF1P0CX08 502 aa4.04□□□□□ -1.76
ROT1YMR200W YNR073CP0CX09 502 aa4.04□□□□□ -1.76
ROT1YMR200W BUB2P26448 306 aaPredicted RBP4.04□□□□□ -1.76
ROT1YMR200W TCA17P32613 152 aa4.04□□□□□ -1.76
ROT1YMR200W MBA1P38300 278 aa4.04□□□□□ -1.76
ROT1YMR200W ECM14P38836 430 aa4.04□□□□□ -1.76
ROT1YMR200W SEN34P39707 275 aa4.04□□□□□ -1.76
ROT1YMR200W YGR201CP42936 225 aa4.04□□□□□ -1.76
ROT1YMR200W NCA3P46955 337 aa4.04□□□□□ -1.76
ROT1YMR200W AIM25P47140 327 aa4.04□□□□□ -1.76
ROT1YMR200W YJR111CP47148 283 aaKnown RBP4.04□□□□□ -1.76
ROT1YMR200W YGR018CP53211 109 aa4.04□□□□□ -1.76
ROT1YMR200W RCF2P53721 224 aa4.04□□□□□ -1.76
ROT1YMR200W CRZ1P53968 678 aa4.04□□□□□ -1.76
ROT1YMR200W SDC1Q03323 175 aa4.04□□□□□ -1.76
ROT1YMR200W HNT1Q04344 158 aaKnown RBP4.04□□□□□ -1.76
ROT1YMR200W FSH2Q05015 223 aa4.04□□□□□ -1.76
ROT1YMR200W LIP2Q06005 328 aa4.04□□□□□ -1.76
ROT1YMR200W MIM1Q08176 113 aa4.04□□□□□ -1.76
ROT1YMR200W THP3Q12049 470 aaKnown RBP4.04□□□□□ -1.76
ROT1YMR200W ATP16Q12165 160 aa4.04□□□□□ -1.76
ROT1YMR200W MDM32Q12171 622 aa4.04□□□□□ -1.76
ROT1YMR200W YFL068WP0CX99 160 aa4.03□□□□□ -1.76
ROT1YMR200W YLL066W-AP0CY00 160 aa4.03□□□□□ -1.76
ROT1YMR200W YLL067W-AP0CY01 160 aa4.03□□□□□ -1.76
ROT1YMR200W NHP6AP11632 93 aaKnown RBP4.03□□□□□ -1.76
ROT1YMR200W YCR023CP25351 611 aa4.03□□□□□ -1.76
ROT1YMR200W ARO7P32178 256 aa4.03□□□□□ -1.76
ROT1YMR200W PMU1P36069 295 aa4.03□□□□□ -1.76
ROT1YMR200W PRY2P36110 329 aa4.03□□□□□ -1.76
ROT1YMR200W LSM4P40070 187 aaKnown RBP4.03□□□□□ -1.76
ROT1YMR200W AVT7P40501 490 aa4.03□□□□□ -1.76
ROT1YMR200W SHY1P53266 389 aa4.03□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms