RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C CTR3Q06686 241 aa1.2□□□□□ -2.22
UBX4YMR067C YBL008W-AQ3E821 79 aa1.2□□□□□ -2.22
UBX4YMR067C OPI1P21957 404 aa1.19□□□□□ -2.22
UBX4YMR067C MEK1P24719 497 aaPredicted RBP1.19□□□□□ -2.22
UBX4YMR067C YGL010WP25338 174 aa1.19□□□□□ -2.22
UBX4YMR067C PHO88P38264 188 aaPredicted RBP1.19□□□□□ -2.22
UBX4YMR067C SSH1P38353 490 aaKnown RBP1.19□□□□□ -2.22
UBX4YMR067C DSE2P38844 325 aa1.19□□□□□ -2.22
UBX4YMR067C DSN1P40568 576 aa1.19□□□□□ -2.22
UBX4YMR067C MAL13P53338 473 aa1.19□□□□□ -2.22
UBX4YMR067C CDC14Q00684 551 aa1.19□□□□□ -2.22
UBX4YMR067C YPR011CQ12251 326 aa1.19□□□□□ -2.22
UBX4YMR067C BBP1Q12365 385 aa1.19□□□□□ -2.22
UBX4YMR067C INO80P53115 1489 aa1.18□□□□□ -2.22
UBX4YMR067C STF1P01098 86 aa1.18□□□□□ -2.22
UBX4YMR067C YHR032W-AP0C5N6 59 aa1.18□□□□□ -2.22
UBX4YMR067C FMP33P46998 180 aa1.18□□□□□ -2.22
UBX4YMR067C YDR124WQ04608 324 aa1.18□□□□□ -2.22
UBX4YMR067C COX5AP00424 153 aa1.17□□□□□ -2.22
UBX4YMR067C YHR125WP38831 101 aa1.17□□□□□ -2.22
UBX4YMR067C AVT2P39981 480 aa1.17□□□□□ -2.22
UBX4YMR067C YER189WP40104 122 aa1.17□□□□□ -2.22
UBX4YMR067C PRM10P42946 383 aa1.17□□□□□ -2.22
UBX4YMR067C YGL185CP53100 379 aa1.17□□□□□ -2.22
UBX4YMR067C FAR8Q05040 523 aa1.17□□□□□ -2.22
UBX4YMR067C USB1Q12208 290 aaKnown RBP1.17□□□□□ -2.22
UBX4YMR067C ATO3Q12359 275 aa1.17□□□□□ -2.22
UBX4YMR067C SNF8Q12483 233 aa1.17□□□□□ -2.22
UBX4YMR067C YLR462WO13556 202 aa1.16□□□□□ -2.22
UBX4YMR067C DDI2P0CH63 225 aa1.16□□□□□ -2.22
UBX4YMR067C DDI3P0CH64 225 aa1.16□□□□□ -2.22
UBX4YMR067C MET16P18408 261 aaPredicted RBP1.16□□□□□ -2.22
UBX4YMR067C YBR220CP38318 560 aa1.16□□□□□ -2.22
UBX4YMR067C YHR022CP38763 256 aa1.16□□□□□ -2.22
UBX4YMR067C CTR2P38865 189 aa1.16□□□□□ -2.22
UBX4YMR067C YEL075CP39972 122 aa1.16□□□□□ -2.22
UBX4YMR067C DDI1P40087 428 aa1.16□□□□□ -2.22
UBX4YMR067C CYT2Q00873 224 aa1.16□□□□□ -2.22
UBX4YMR067C NUP49Q02199 472 aa1.16□□□□□ -2.22
UBX4YMR067C SPP2Q02521 185 aa1.16□□□□□ -2.22
UBX4YMR067C GMC2Q06201 188 aa1.16□□□□□ -2.22
UBX4YMR067C FMP16Q12497 93 aa1.16□□□□□ -2.22
UBX4YMR067C YIL002W-AQ3E7Z5 69 aa1.16□□□□□ -2.22
UBX4YMR067C EBP2P36049 427 aaKnown RBP1.15□□□□□ -2.23
UBX4YMR067C MRPL40P36534 297 aa1.15□□□□□ -2.23
UBX4YMR067C YKE4P40544 346 aa1.15□□□□□ -2.23
UBX4YMR067C YJR079WP47126 109 aa1.15□□□□□ -2.23
UBX4YMR067C YGR219WP53307 113 aa1.15□□□□□ -2.23
UBX4YMR067C ERV15P38312 142 aa1.14□□□□□ -2.23
UBX4YMR067C YBR219CP38317 127 aa1.14□□□□□ -2.23
UBX4YMR067C PEX18P38855 283 aa1.14□□□□□ -2.23
UBX4YMR067C GLE2P40066 365 aa1.14□□□□□ -2.23
UBX4YMR067C YJR012CP47087 207 aa1.14□□□□□ -2.23
UBX4YMR067C MRH4P53166 561 aa1.14□□□□□ -2.23
UBX4YMR067C YGL034CP53186 121 aa1.14□□□□□ -2.23
UBX4YMR067C BUD25P85052 153 aa1.14□□□□□ -2.23
UBX4YMR067C ATG17Q06410 417 aa1.14□□□□□ -2.23
UBX4YMR067C SYC1Q08553 188 aaPredicted RBP1.14□□□□□ -2.23
UBX4YMR067C DNA2P38859 1522 aa1.14□□□□□ -2.23
UBX4YMR067C RPL9AP05738 191 aaKnown RBP1.13□□□□□ -2.23
UBX4YMR067C FPR1P20081 114 aaKnown RBP1.13□□□□□ -2.23
UBX4YMR067C OAC1P32332 324 aa1.13□□□□□ -2.23
UBX4YMR067C FZO1P38297 855 aa1.13□□□□□ -2.23
UBX4YMR067C COA1P40452 197 aa1.13□□□□□ -2.23
UBX4YMR067C RPL9BP51401 191 aaKnown RBP1.13□□□□□ -2.23
UBX4YMR067C GOT1Q03554 138 aa1.13□□□□□ -2.23
UBX4YMR067C KOG1P38873 1557 aa1.13□□□□□ -2.23
UBX4YMR067C SIR4P11978 1358 aa1.12□□□□□ -2.23
UBX4YMR067C KAP114P53067 1004 aa1.12□□□□□ -2.23
UBX4YMR067C YNR062CP53748 327 aa1.12□□□□□ -2.23
UBX4YMR067C NEJ1Q06148 342 aa1.12□□□□□ -2.23
UBX4YMR067C YLR179CQ06252 201 aaKnown RBP1.12□□□□□ -2.23
UBX4YMR067C YLR413WQ06689 675 aa1.12□□□□□ -2.23
UBX4YMR067C YPL119C-AQ3E751 87 aa1.12□□□□□ -2.23
UBX4YMR067C SSK22P25390 1331 aaPredicted RBP1.12□□□□□ -2.23
UBX4YMR067C HIS1P00498 297 aaKnown RBP1.11□□□□□ -2.23
UBX4YMR067C VPS3P23643 1011 aa1.11□□□□□ -2.23
UBX4YMR067C YKL070WP36087 169 aa1.11□□□□□ -2.23
UBX4YMR067C SVP26P38869 228 aa1.11□□□□□ -2.23
UBX4YMR067C RMR1P53060 241 aa1.11□□□□□ -2.23
UBX4YMR067C GTR2P53290 341 aa1.11□□□□□ -2.23
UBX4YMR067C EGD1Q02642 157 aaKnown RBP1.11□□□□□ -2.23
UBX4YMR067C YPR147CQ06522 304 aaKnown RBP1.11□□□□□ -2.23
UBX4YMR067C MRPL23Q12487 163 aaPredicted RBP1.11□□□□□ -2.23
UBX4YMR067C SWI1P09547 1314 aa1.11□□□□□ -2.23
UBX4YMR067C MSW1P04803 379 aa1.1□□□□□ -2.23
UBX4YMR067C YKR104WP0CE69 306 aa1.1□□□□□ -2.23
UBX4YMR067C DBP3P20447 523 aaKnown RBP1.1□□□□□ -2.23
UBX4YMR067C VMA11P32842 164 aa1.1□□□□□ -2.23
UBX4YMR067C MSA2P36157 363 aa1.1□□□□□ -2.23
UBX4YMR067C THO1P40040 218 aaKnown RBP1.1□□□□□ -2.23
UBX4YMR067C RPL13BP40212 199 aaKnown RBP1.1□□□□□ -2.23
UBX4YMR067C YIL001WP40560 513 aa1.1□□□□□ -2.23
UBX4YMR067C YGL159WP53110 370 aa1.1□□□□□ -2.23
UBX4YMR067C YLR162WQ06235 118 aa1.1□□□□□ -2.23
UBX4YMR067C YLR030WQ07967 263 aa1.1□□□□□ -2.23
UBX4YMR067C CSI2Q08054 341 aa1.1□□□□□ -2.23
UBX4YMR067C RIO1Q12196 484 aaKnown RBP1.1□□□□□ -2.23
UBX4YMR067C RPL13AQ12690 199 aaPredicted RBP1.1□□□□□ -2.23
UBX4YMR067C SWR1Q05471 1514 aa1.1□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms