RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W GCD14P46959 383 aaPredicted RBP1.25□□□□□ -2.21
CTK3YML112W GIM3P53900 129 aa1.25□□□□□ -2.21
CTK3YML112W DAD3P69850 94 aa1.25□□□□□ -2.21
CTK3YML112W CTR3Q06686 241 aa1.25□□□□□ -2.21
CTK3YML112W YLR413WQ06689 675 aa1.25□□□□□ -2.21
CTK3YML112W GRE1Q08969 168 aa1.25□□□□□ -2.21
CTK3YML112W AI5_BETAQ9ZZX0 354 aa1.25□□□□□ -2.21
CTK3YML112W PPH21P23594 369 aa1.24□□□□□ -2.21
CTK3YML112W ACP1P32463 125 aa1.24□□□□□ -2.21
CTK3YML112W BMH2P34730 273 aaKnown RBP1.24□□□□□ -2.21
CTK3YML112W HOP2P53187 214 aa1.24□□□□□ -2.21
CTK3YML112W MNT4P53745 580 aa1.24□□□□□ -2.21
CTK3YML112W AAH1P53909 347 aa1.24□□□□□ -2.21
CTK3YML112W ATC1Q04005 294 aa1.24□□□□□ -2.21
CTK3YML112W ERV41Q04651 352 aa1.24□□□□□ -2.21
CTK3YML112W LOA1Q06508 300 aa1.24□□□□□ -2.21
CTK3YML112W STH1P32597 1359 aa1.23□□□□□ -2.21
CTK3YML112W SSK22P25390 1331 aaPredicted RBP1.23□□□□□ -2.21
CTK3YML112W YKL070WP36087 169 aa1.23□□□□□ -2.21
CTK3YML112W SIP3P38717 1229 aa1.23□□□□□ -2.21
CTK3YML112W RTR1P40084 226 aaPredicted RBP1.23□□□□□ -2.21
CTK3YML112W OST2P46964 130 aa1.23□□□□□ -2.21
CTK3YML112W MDM34P53083 459 aa1.23□□□□□ -2.21
CTK3YML112W MPP6P53725 186 aaPredicted RBP1.23□□□□□ -2.21
CTK3YML112W VBA1Q04301 562 aa1.23□□□□□ -2.21
CTK3YML112W SSQ1Q05931 657 aaPredicted RBP1.23□□□□□ -2.21
CTK3YML112W GGA1Q06336 557 aa1.23□□□□□ -2.21
CTK3YML112W RAD9P14737 1309 aa1.22□□□□□ -2.21
CTK3YML112W MATALPHA1P0CY06 175 aa1.22□□□□□ -2.21
CTK3YML112W HMLALPHA1P0CY07 175 aa1.22□□□□□ -2.21
CTK3YML112W FBA1P14540 359 aaKnown RBP1.22□□□□□ -2.21
CTK3YML112W VPS3P23643 1011 aa1.22□□□□□ -2.21
CTK3YML112W SRB4P32569 687 aa1.22□□□□□ -2.21
CTK3YML112W VTC1P40046 129 aaRIP-Chip data1.22□□□□□ -2.21not detected
CTK3YML112W PEP8P40335 379 aa1.22□□□□□ -2.21
CTK3YML112W AYR1P40471 297 aa1.22□□□□□ -2.21
CTK3YML112W SER33P40510 469 aa1.22□□□□□ -2.21
CTK3YML112W MSS2P40990 351 aa1.22□□□□□ -2.21
CTK3YML112W LIA1P47120 325 aaKnown RBP1.22□□□□□ -2.21
CTK3YML112W RMR1P53060 241 aa1.22□□□□□ -2.21
CTK3YML112W EGD1Q02642 157 aaKnown RBP1.22□□□□□ -2.21
CTK3YML112W YBL008W-AQ3E821 79 aa1.22□□□□□ -2.21
CTK3YML112W RSR1P13856 272 aa1.21□□□□□ -2.22
CTK3YML112W FRS2P15625 503 aaKnown RBP1.21□□□□□ -2.22
CTK3YML112W MEK1P24719 497 aaPredicted RBP1.21□□□□□ -2.22
CTK3YML112W POF1P25576 258 aa1.21□□□□□ -2.22
CTK3YML112W MAK5P38112 773 aaPredicted RBP1.21□□□□□ -2.22
CTK3YML112W ECM13P38195 257 aa1.21□□□□□ -2.22
CTK3YML112W COS8P38723 381 aa1.21□□□□□ -2.22
CTK3YML112W ARC15P40518 154 aaRIP-Chip data1.21□□□□□ -2.22not detected
CTK3YML112W BNA6P43619 295 aa1.21□□□□□ -2.22
CTK3YML112W EFM5P53200 248 aaKnown RBP1.21□□□□□ -2.22
CTK3YML112W YNL247WP53852 767 aaKnown RBP1.21□□□□□ -2.22
CTK3YML112W CTF19Q02732 369 aa1.21□□□□□ -2.22
CTK3YML112W PET117Q02771 107 aa1.21□□□□□ -2.22
CTK3YML112W MRPS17Q03246 237 aaPredicted RBP1.21□□□□□ -2.22
CTK3YML112W YLR173WQ06247 608 aa1.21□□□□□ -2.22
CTK3YML112W YOR029WQ12243 111 aa1.21□□□□□ -2.22
CTK3YML112W FMP16Q12497 93 aa1.21□□□□□ -2.22
CTK3YML112W COS2P0CX12 379 aa1.2□□□□□ -2.22
CTK3YML112W COS3P0CX13 379 aa1.2□□□□□ -2.22
CTK3YML112W MET16P18408 261 aaPredicted RBP1.2□□□□□ -2.22
CTK3YML112W RCN1P36054 211 aa1.2□□□□□ -2.22
CTK3YML112W YHL049CP38722 271 aa1.2□□□□□ -2.22
CTK3YML112W TCD1P38756 429 aa1.2□□□□□ -2.22
CTK3YML112W YER085CP40058 173 aa1.2□□□□□ -2.22
CTK3YML112W EMC2P47133 292 aaKnown RBP1.2□□□□□ -2.22
CTK3YML112W CGR1P53188 120 aa1.2□□□□□ -2.22
CTK3YML112W YGR026WP53217 278 aa1.2□□□□□ -2.22
CTK3YML112W MAL13P53338 473 aa1.2□□□□□ -2.22
CTK3YML112W PGA2P53903 129 aa1.2□□□□□ -2.22
CTK3YML112W SPP2Q02521 185 aa1.2□□□□□ -2.22
CTK3YML112W EMI1Q04406 187 aa1.2□□□□□ -2.22
CTK3YML112W COX20Q04935 205 aa1.2□□□□□ -2.22
CTK3YML112W FUS2Q05670 677 aa1.2□□□□□ -2.22
CTK3YML112W BRX1Q08235 291 aaKnown RBP1.2□□□□□ -2.22
CTK3YML112W SME1Q12330 94 aaPredicted RBP1.2□□□□□ -2.22
CTK3YML112W BBP1Q12365 385 aa1.2□□□□□ -2.22
CTK3YML112W TUS1Q06412 1307 aa1.19□□□□□ -2.22
CTK3YML112W HIS1P00498 297 aaKnown RBP1.19□□□□□ -2.22
CTK3YML112W RHO1P06780 209 aaKnown RBP1.19□□□□□ -2.22
CTK3YML112W SSA3P09435 649 aaKnown RBP1.19□□□□□ -2.22
CTK3YML112W MATALPHA2P0CY08 210 aa1.19□□□□□ -2.22
CTK3YML112W HMLALPHA2P0CY09 210 aa1.19□□□□□ -2.22
CTK3YML112W POL30P15873 258 aaKnown RBP1.19□□□□□ -2.22
CTK3YML112W CBF1P17106 351 aa1.19□□□□□ -2.22
CTK3YML112W YPK2P18961 677 aa1.19□□□□□ -2.22
CTK3YML112W YCR016WP25617 290 aaKnown RBP1.19□□□□□ -2.22
CTK3YML112W CBT1P36038 271 aaPredicted RBP1.19□□□□□ -2.22
CTK3YML112W YRB2P40517 327 aa1.19□□□□□ -2.22
CTK3YML112W GCN20P43535 752 aaKnown RBP1.19□□□□□ -2.22
CTK3YML112W OTU1P43558 301 aa1.19□□□□□ -2.22
CTK3YML112W FMP33P46998 180 aa1.19□□□□□ -2.22
CTK3YML112W YJR012CP47087 207 aa1.19□□□□□ -2.22
CTK3YML112W ERG25P53045 309 aa1.19□□□□□ -2.22
CTK3YML112W NOP13P53883 403 aaKnown RBP RIP-Chip data1.19□□□□□ -2.22not detected
CTK3YML112W YDR124WQ04608 324 aa1.19□□□□□ -2.22
CTK3YML112W GMC2Q06201 188 aa1.19□□□□□ -2.22
CTK3YML112W CDC33P07260 213 aaKnown RBP1.18□□□□□ -2.22
CTK3YML112W SGA1P08019 549 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 25.6 ms