RNA–Protein interactions for RNA: YKR101W

SIR1, Transcript of Protein involved in silencing at mating-type loci HML and HMR, yeastyeast

Gene SIR1, Length 1,965 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR1YKR101W USE1P53146 245 aa3.65□□□□□ -1.82
SIR1YKR101W ASI3P53983 676 aa3.65□□□□□ -1.82
SIR1YKR101W ATG38Q05789 226 aaKnown RBP3.65□□□□□ -1.82
SIR1YKR101W SSQ1Q05931 657 aaPredicted RBP3.65□□□□□ -1.82
SIR1YKR101W YOL029CQ08187 201 aa3.65□□□□□ -1.82
SIR1YKR101W YCT1Q12235 531 aa3.65□□□□□ -1.82
SIR1YKR101W YOL085CQ99345 113 aa3.65□□□□□ -1.82
SIR1YKR101W AI5_BETAQ9ZZX0 354 aa3.65□□□□□ -1.82
SIR1YKR101W RPS19AP07280 144 aaKnown RBP3.65□□□□□ -1.83
SIR1YKR101W RPS19BP07281 144 aaPredicted RBP3.65□□□□□ -1.83
SIR1YKR101W ALK2P32789 676 aaPredicted RBP3.65□□□□□ -1.83
SIR1YKR101W CBT1P36038 271 aaPredicted RBP3.65□□□□□ -1.83
SIR1YKR101W ERG28P40030 148 aa3.65□□□□□ -1.83
SIR1YKR101W THO1P40040 218 aaKnown RBP3.65□□□□□ -1.83
SIR1YKR101W MHR1Q06630 226 aa3.65□□□□□ -1.83
SIR1YKR101W PLB3Q08108 686 aa3.65□□□□□ -1.83
SIR1YKR101W RPL4AP10664 362 aaKnown RBP3.64□□□□□ -1.83
SIR1YKR101W PRP18P33411 251 aaPredicted RBP3.64□□□□□ -1.83
SIR1YKR101W MRPL3P36516 390 aa3.64□□□□□ -1.83
SIR1YKR101W MRP21P38175 177 aa3.64□□□□□ -1.83
SIR1YKR101W HEK2P38199 381 aaKnown RBP RIP-Chip data3.64□□□□□ -1.83not detected
SIR1YKR101W MED8P38304 223 aa3.64□□□□□ -1.83
SIR1YKR101W RPL4BP49626 362 aaKnown RBP3.64□□□□□ -1.83
SIR1YKR101W ECM19Q06011 112 aa3.64□□□□□ -1.83
SIR1YKR101W COQ10Q08058 207 aa3.64□□□□□ -1.83
SIR1YKR101W TRM10Q12400 293 aa3.64□□□□□ -1.83
SIR1YKR101W YKL183C-AQ3E765 70 aa3.64□□□□□ -1.83
SIR1YKR101W YAL067W-AQ8TGK6 75 aa3.64□□□□□ -1.83
SIR1YKR101W YMR31P19955 123 aa3.63□□□□□ -1.83
SIR1YKR101W SPS19P32573 292 aaKnown RBP3.63□□□□□ -1.83
SIR1YKR101W ZRT3P34240 503 aa3.63□□□□□ -1.83
SIR1YKR101W MAL32P38158 584 aa3.63□□□□□ -1.83
SIR1YKR101W GPI18P38211 433 aa3.63□□□□□ -1.83
SIR1YKR101W YHL049CP38722 271 aa3.63□□□□□ -1.83
SIR1YKR101W YIL012WP40551 113 aa3.63□□□□□ -1.83
SIR1YKR101W YFL064CP43540 174 aa3.63□□□□□ -1.83
SIR1YKR101W MAL12P53341 584 aa3.63□□□□□ -1.83
SIR1YKR101W ACT1P60010 375 aaKnown RBP3.63□□□□□ -1.83
SIR1YKR101W MRPS16Q02608 121 aa3.63□□□□□ -1.83
SIR1YKR101W BNA7Q04066 261 aa3.63□□□□□ -1.83
SIR1YKR101W UTP15Q04305 513 aaKnown RBP3.63□□□□□ -1.83
SIR1YKR101W SEY1Q99287 776 aa3.63□□□□□ -1.83
SIR1YKR101W TPI1P00942 248 aaKnown RBP3.63□□□□□ -1.83
SIR1YKR101W RPB9P27999 122 aa3.63□□□□□ -1.83
SIR1YKR101W IMP1P28627 190 aa3.63□□□□□ -1.83
SIR1YKR101W RRT13P40042 185 aa3.63□□□□□ -1.83
SIR1YKR101W YGL039WP53183 348 aaKnown RBP3.63□□□□□ -1.83
SIR1YKR101W MRS2Q01926 470 aa3.63□□□□□ -1.83
SIR1YKR101W TMC1Q08422 150 aaPredicted RBP3.63□□□□□ -1.83
SIR1YKR101W SWI1P09547 1314 aa3.62□□□□□ -1.83
SIR1YKR101W TPS2P31688 896 aaKnown RBP3.62□□□□□ -1.83
SIR1YKR101W YEL045CP32616 141 aa3.62□□□□□ -1.83
SIR1YKR101W POP8P38208 133 aa3.62□□□□□ -1.83
SIR1YKR101W GOS1P38736 223 aa3.62□□□□□ -1.83
SIR1YKR101W SNM1P40993 198 aa3.62□□□□□ -1.83
SIR1YKR101W HAM1P47119 197 aaKnown RBP3.62□□□□□ -1.83
SIR1YKR101W COG7P53195 279 aa3.62□□□□□ -1.83
SIR1YKR101W YGR018CP53211 109 aa3.62□□□□□ -1.83
SIR1YKR101W POX1P13711 748 aa3.62□□□□□ -1.83
SIR1YKR101W VPH2P32341 215 aa3.62□□□□□ -1.83
SIR1YKR101W YKL075CP36083 450 aa3.62□□□□□ -1.83
SIR1YKR101W KRE29P40026 464 aa3.62□□□□□ -1.83
SIR1YKR101W CWC23P52868 283 aaPredicted RBP3.62□□□□□ -1.83
SIR1YKR101W SNZ1Q03148 297 aa3.62□□□□□ -1.83
SIR1YKR101W YPR098CQ06089 161 aa3.62□□□□□ -1.83
SIR1YKR101W DFM1Q12743 341 aaKnown RBP3.62□□□□□ -1.83
SIR1YKR101W YMR316C-AI2HB70 103 aa3.61□□□□□ -1.83
SIR1YKR101W APA2P22108 325 aa3.61□□□□□ -1.83
SIR1YKR101W ASF2P32448 525 aaPredicted RBP3.61□□□□□ -1.83
SIR1YKR101W DBP7P36120 742 aaKnown RBP3.61□□□□□ -1.83
SIR1YKR101W YNL194CP40169 301 aa3.61□□□□□ -1.83
SIR1YKR101W PRP24P49960 444 aaKnown RBP3.61□□□□□ -1.83
SIR1YKR101W YGL262WP53054 175 aa3.61□□□□□ -1.83
SIR1YKR101W GIM3P53900 129 aa3.61□□□□□ -1.83
SIR1YKR101W TSA2Q04120 196 aa3.61□□□□□ -1.83
SIR1YKR101W ADH1P00330 348 aaKnown RBP3.6□□□□□ -1.83
SIR1YKR101W FUS3P16892 353 aaKnown RBP3.6□□□□□ -1.83
SIR1YKR101W TAF14P35189 244 aa3.6□□□□□ -1.83
SIR1YKR101W CUS2P53830 285 aaPredicted RBP3.6□□□□□ -1.83
SIR1YKR101W YPR172WQ06608 200 aa3.6□□□□□ -1.83
SIR1YKR101W RFM1Q12192 310 aa3.6□□□□□ -1.83
SIR1YKR101W YDR157WA0A023PZE8 133 aa3.6□□□□□ -1.83
SIR1YKR101W MER1P16523 270 aa3.6□□□□□ -1.83
SIR1YKR101W STE18P18852 110 aa3.6□□□□□ -1.83
SIR1YKR101W EPT1P22140 391 aa3.6□□□□□ -1.83
SIR1YKR101W NTF2P33331 125 aaKnown RBP3.6□□□□□ -1.83
SIR1YKR101W SNZ3P43545 298 aa3.6□□□□□ -1.83
SIR1YKR101W LIF1P53150 421 aa3.6□□□□□ -1.83
SIR1YKR101W RRS1Q08746 203 aaKnown RBP3.6□□□□□ -1.83
SIR1YKR101W GET4Q12125 312 aa3.6□□□□□ -1.83
SIR1YKR101W NCB2Q92317 146 aa3.6□□□□□ -1.83
SIR1YKR101W YBR121C-AP0C5L4 52 aa3.59□□□□□ -1.83
SIR1YKR101W COS2P0CX12 379 aa3.59□□□□□ -1.83
SIR1YKR101W COS3P0CX13 379 aa3.59□□□□□ -1.83
SIR1YKR101W PCL1P24867 279 aa3.59□□□□□ -1.83
SIR1YKR101W CAM1P29547 415 aaKnown RBP3.59□□□□□ -1.83
SIR1YKR101W YRB1P41920 201 aaKnown RBP3.59□□□□□ -1.83
SIR1YKR101W COS4P43542 379 aa3.59□□□□□ -1.83
SIR1YKR101W CPR7P47103 393 aa3.59□□□□□ -1.83
SIR1YKR101W SDT1P53078 280 aa3.59□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms