RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C RPL15BP54780 204 aaPredicted RBP5.03□□□□□ -1.6
DEF1YKL054C YET2Q04210 160 aa5.03□□□□□ -1.6
DEF1YKL054C HCR1Q05775 265 aaKnown RBP5.03□□□□□ -1.6
DEF1YKL054C MSA1Q08471 629 aa5.03□□□□□ -1.6
DEF1YKL054C YOR292CQ08743 309 aa5.03□□□□□ -1.6
DEF1YKL054C CDC43P18898 376 aa5.02□□□□□ -1.61
DEF1YKL054C MCK1P21965 375 aaKnown RBP5.02□□□□□ -1.61
DEF1YKL054C YCR025CP25352 136 aa5.02□□□□□ -1.61
DEF1YKL054C ATS1P31386 333 aa5.02□□□□□ -1.61
DEF1YKL054C YAP3P38749 330 aa5.02□□□□□ -1.61
DEF1YKL054C ECM14P38836 430 aa5.02□□□□□ -1.61
DEF1YKL054C HSK3P69852 69 aa5.02□□□□□ -1.61
DEF1YKL054C DYN3Q04949 312 aa5.02□□□□□ -1.61
DEF1YKL054C TIR4Q12218 487 aaPredicted RBP5.02□□□□□ -1.61
DEF1YKL054C YIL067CP40514 678 aa5.01□□□□□ -1.61
DEF1YKL054C MPA43P53583 542 aaPredicted RBP5.01□□□□□ -1.61
DEF1YKL054C CRZ1P53968 678 aa5.01□□□□□ -1.61
DEF1YKL054C YMR254CQ04838 102 aa5.01□□□□□ -1.61
DEF1YKL054C RFU1Q08003 200 aa5.01□□□□□ -1.61
DEF1YKL054C YOL019WQ08157 551 aa5.01□□□□□ -1.61
DEF1YKL054C RAX2Q12465 1220 aa5.01□□□□□ -1.61
DEF1YKL054C SSH1P38353 490 aaKnown RBP5.01□□□□□ -1.61
DEF1YKL054C PEX17P40155 199 aa5.01□□□□□ -1.61
DEF1YKL054C YGL034CP53186 121 aa5.01□□□□□ -1.61
DEF1YKL054C YOR186WQ08560 144 aa5.01□□□□□ -1.61
DEF1YKL054C ERV2Q12284 196 aa5.01□□□□□ -1.61
DEF1YKL054C EAF3Q12432 401 aa5.01□□□□□ -1.61
DEF1YKL054C RAD50P12753 1312 aa5.01□□□□□ -1.61
DEF1YKL054C UFE1P41834 346 aa5□□□□□ -1.61
DEF1YKL054C FMP41P53889 259 aaKnown RBP5□□□□□ -1.61
DEF1YKL054C ATP16Q12165 160 aa5□□□□□ -1.61
DEF1YKL054C TFC7Q12415 435 aa5□□□□□ -1.61
DEF1YKL054C STE7P06784 515 aa5□□□□□ -1.61
DEF1YKL054C YCR090CP25654 182 aaKnown RBP5□□□□□ -1.61
DEF1YKL054C MTC4P38335 694 aaKnown RBP5□□□□□ -1.61
DEF1YKL054C NVJ1P38881 321 aa5□□□□□ -1.61
DEF1YKL054C PDS1P40316 373 aaPredicted RBP5□□□□□ -1.61
DEF1YKL054C CIN5P40917 295 aa5□□□□□ -1.61
DEF1YKL054C YNL184CP53876 108 aa5□□□□□ -1.61
DEF1YKL054C LIP2Q06005 328 aa5□□□□□ -1.61
DEF1YKL054C THP3Q12049 470 aaKnown RBP5□□□□□ -1.61
DEF1YKL054C SOL2P37262 315 aa4.99□□□□□ -1.61
DEF1YKL054C SLM6P38343 150 aa4.99□□□□□ -1.61
DEF1YKL054C PTI1P39927 425 aaPredicted RBP4.99□□□□□ -1.61
DEF1YKL054C YMR144WP40214 342 aaKnown RBP4.99□□□□□ -1.61
DEF1YKL054C MRH4P53166 561 aa4.99□□□□□ -1.61
DEF1YKL054C NRM1P53718 249 aa4.99□□□□□ -1.61
DEF1YKL054C CWC25P53854 179 aaKnown RBP4.99□□□□□ -1.61
DEF1YKL054C INM2Q05533 292 aa4.99□□□□□ -1.61
DEF1YKL054C YLR036CQ07986 203 aa4.99□□□□□ -1.61
DEF1YKL054C RPN8Q08723 338 aaKnown RBP4.99□□□□□ -1.61
DEF1YKL054C ATX2Q12067 313 aa4.99□□□□□ -1.61
DEF1YKL054C YPL245WQ12179 454 aaKnown RBP4.99□□□□□ -1.61
DEF1YKL054C IGO2Q9P305 131 aa4.99□□□□□ -1.61
DEF1YKL054C COS2P0CX12 379 aa4.99□□□□□ -1.61
DEF1YKL054C COS3P0CX13 379 aa4.99□□□□□ -1.61
DEF1YKL054C YFL068WP0CX99 160 aa4.99□□□□□ -1.61
DEF1YKL054C YLL066W-AP0CY00 160 aa4.99□□□□□ -1.61
DEF1YKL054C YLL067W-AP0CY01 160 aa4.99□□□□□ -1.61
DEF1YKL054C FRM2P37261 193 aa4.99□□□□□ -1.61
DEF1YKL054C AVT7P40501 490 aa4.99□□□□□ -1.61
DEF1YKL054C YIL024CP40543 189 aa4.99□□□□□ -1.61
DEF1YKL054C PSA1P41940 361 aaKnown RBP4.99□□□□□ -1.61
DEF1YKL054C SHY1P53266 389 aa4.99□□□□□ -1.61
DEF1YKL054C TRM10Q12400 293 aa4.99□□□□□ -1.61
DEF1YKL054C ECM5Q03214 1411 aa4.98□□□□□ -1.61
DEF1YKL054C ATR1P13090 542 aa4.98□□□□□ -1.61
DEF1YKL054C ARN2P38724 620 aa4.98□□□□□ -1.61
DEF1YKL054C FLO5P38894 1075 aa4.98□□□□□ -1.61
DEF1YKL054C LSM4P40070 187 aaKnown RBP4.98□□□□□ -1.61
DEF1YKL054C EGT2P42835 1041 aa4.98□□□□□ -1.61
DEF1YKL054C SNX4P47057 423 aa4.98□□□□□ -1.61
DEF1YKL054C SDS23P53172 527 aa4.98□□□□□ -1.61
DEF1YKL054C PRM8P53174 237 aa4.98□□□□□ -1.61
DEF1YKL054C AYT1Q12226 474 aa4.98□□□□□ -1.61
DEF1YKL054C MHP1P43638 1398 aa4.98□□□□□ -1.61
DEF1YKL054C TRX3P25372 127 aa4.97□□□□□ -1.61
DEF1YKL054C SEC1P30619 724 aaKnown RBP4.97□□□□□ -1.61
DEF1YKL054C TCA17P32613 152 aa4.97□□□□□ -1.61
DEF1YKL054C TRS65P32893 560 aa4.97□□□□□ -1.61
DEF1YKL054C PMU1P36069 295 aa4.97□□□□□ -1.61
DEF1YKL054C YER137CP40083 148 aaKnown RBP4.97□□□□□ -1.61
DEF1YKL054C ADD37Q03233 198 aa4.97□□□□□ -1.61
DEF1YKL054C YLR031WQ07978 186 aa4.97□□□□□ -1.61
DEF1YKL054C RRP40Q08285 240 aaKnown RBP4.97□□□□□ -1.61
DEF1YKL054C FDH1Q08911 376 aa4.97□□□□□ -1.61
DEF1YKL054C SEC22P22214 214 aa4.97□□□□□ -1.61
DEF1YKL054C AIM17P23180 465 aaKnown RBP4.97□□□□□ -1.61
DEF1YKL054C OAR1P35731 278 aa4.97□□□□□ -1.61
DEF1YKL054C MOH1P38191 138 aa4.97□□□□□ -1.61
DEF1YKL054C RPR2P40571 144 aa4.97□□□□□ -1.61
DEF1YKL054C SWP1Q02795 286 aa4.97□□□□□ -1.61
DEF1YKL054C HNT1Q04344 158 aaKnown RBP4.97□□□□□ -1.61
DEF1YKL054C WIP1Q2V2P8 89 aa4.97□□□□□ -1.61
DEF1YKL054C YLR361C-AQ3E795 98 aa4.97□□□□□ -1.61
DEF1YKL054C IDP1P21954 428 aaKnown RBP4.96□□□□□ -1.62
DEF1YKL054C NAT2P37293 288 aa4.96□□□□□ -1.62
DEF1YKL054C DOG1P38774 246 aa4.96□□□□□ -1.62
DEF1YKL054C YGR201CP42936 225 aa4.96□□□□□ -1.62
DEF1YKL054C FAR7P43592 221 aa4.96□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 26.2 ms