RNA–Protein interactions for RNA: YHR170W

NMD3, Transcript of Protein involved in nuclear export of the large ribosomal subunit, yeast

Gene NMD3, Length 1,557 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NMD3	YHR170W	CPR3	P25719	182 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	TRS65	P32893	560 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	ECT1	P33412	323 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	YBR144C	P34215	104 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	COS9	P36034	407 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	PAU24	P38155	120 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	PEX32	P38292	413 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	ARO9	P38840	513 aa	Predicted RBP	4.01	□□□□□ -1.77
NMD3	YHR170W	PTH1	P38876	190 aa	Known RBP	4.01	□□□□□ -1.77
NMD3	YHR170W	SSO2	P39926	295 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	AIM20	P40451	204 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	POP1	P41812	875 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	GDS1	P41913	522 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	SER2	P42941	309 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	RPA34	P47006	233 aa	Predicted RBP	4.01	□□□□□ -1.77
NMD3	YHR170W	IMD3	P50095	523 aa	Known RBP	4.01	□□□□□ -1.77
NMD3	YHR170W	YGR126W	P53274	230 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	PAU12	P53343	120 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	GIM3	P53900	129 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	SKO1	Q02100	647 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	CGI121	Q03705	181 aa	Known RBP	4.01	□□□□□ -1.77
NMD3	YHR170W	MIX14	Q04341	121 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	ASR1	Q06834	288 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	RDL2	Q08742	149 aa	Known RBP	4.01	□□□□□ -1.77
NMD3	YHR170W	RAX1	Q08760	435 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	MDM32	Q12171	622 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	YPR1	Q12458	312 aa		4.01	□□□□□ -1.77
NMD3	YHR170W	OPI3	P05375	206 aa		4	□□□□□ -1.77
NMD3	YHR170W	STE18	P18852	110 aa		4	□□□□□ -1.77
NMD3	YHR170W	PRE7	P23724	241 aa	Known RBP	4	□□□□□ -1.77
NMD3	YHR170W	SCO1	P23833	295 aa		4	□□□□□ -1.77
NMD3	YHR170W	FUN19	P28003	413 aa	Predicted RBP	4	□□□□□ -1.77
NMD3	YHR170W	IPI1	P38803	334 aa	Predicted RBP	4	□□□□□ -1.77
NMD3	YHR170W	SHO1	P40073	367 aa		4	□□□□□ -1.77
NMD3	YHR170W	YIL067C	P40514	678 aa		4	□□□□□ -1.77
NMD3	YHR170W	ECM27	P47144	725 aa		4	□□□□□ -1.77
NMD3	YHR170W	YIP5	P53108	310 aa		4	□□□□□ -1.77
NMD3	YHR170W	YKR005C	Q02203	525 aa		4	□□□□□ -1.77
NMD3	YHR170W	SCS7	Q03529	384 aa		4	□□□□□ -1.77
NMD3	YHR170W	BUR2	Q05949	395 aa		4	□□□□□ -1.77
NMD3	YHR170W	YFH1	Q07540	174 aa		4	□□□□□ -1.77
NMD3	YHR170W	IRC19	Q07843	230 aa		4	□□□□□ -1.77
NMD3	YHR170W	HMS1	Q12398	434 aa		4	□□□□□ -1.77
NMD3	YHR170W	SET6	Q12529	373 aa		4	□□□□□ -1.77
NMD3	YHR170W	YER175W-A	Q8TGU4	54 aa		4	□□□□□ -1.77
NMD3	YHR170W	TEL1	P38110	2787 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	YAL064W-B	O13512	126 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	ILV5	P06168	395 aa	Known RBP	3.99	□□□□□ -1.77
NMD3	YHR170W	ADK1	P07170	222 aa	Known RBP	3.99	□□□□□ -1.77
NMD3	YHR170W	YGL041W-A	P0C5N3	154 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	PCL1	P24867	279 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	EHD3	P28817	500 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	RPC34	P32910	317 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	MSN4	P33749	630 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	FLO10	P36170	1169 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	APD1	P38281	316 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	VBA2	P38358	474 aa	Known RBP	3.99	□□□□□ -1.77
NMD3	YHR170W	FCY21	P40039	528 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	YIL169C	P40442	995 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	REE1	P40893	198 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	ATG18	P43601	500 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	LYS20	P48570	428 aa	Known RBP	3.99	□□□□□ -1.77
NMD3	YHR170W	ERV29	P53337	310 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	YNL092W	P53934	400 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	NUP116	Q02630	1113 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	PFA5	Q03289	374 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	YDR209C	Q03480	137 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	YDR249C	Q03787	373 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	YDR102C	Q03864	110 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	BNA7	Q04066	261 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	GPN3	Q06543	272 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	MRPL35	Q06678	367 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	YBR255C-A	Q3E776	120 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	SUS1	Q6WNK7	96 aa		3.99	□□□□□ -1.77
NMD3	YHR170W	PEP4	P07267	405 aa	Known RBP	3.98	□□□□□ -1.77
NMD3	YHR170W	YHR214C-D	P0CX93	97 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	MDH2	P22133	377 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	AHC2	P25649	128 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	SPT14	P32363	452 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	TMA19	P35691	167 aa	Known RBP	3.98	□□□□□ -1.77
NMD3	YHR170W	ANR2	P36090	516 aa	Predicted RBP	3.98	□□□□□ -1.77
NMD3	YHR170W	RFC4	P40339	323 aa	Known RBP	3.98	□□□□□ -1.77
NMD3	YHR170W	ECO1	P43605	281 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	YHC3	P47040	408 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	PMT5	P52867	743 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	DOC1	P53068	250 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	PET191	Q02772	108 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	SDC1	Q03323	175 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	ATC1	Q04005	294 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	PEX10	Q05568	337 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	CTS2	Q06350	511 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	YPR147C	Q06522	304 aa	Known RBP	3.98	□□□□□ -1.77
NMD3	YHR170W	ATG41	Q12048	136 aa		3.98	□□□□□ -1.77
NMD3	YHR170W	HIS3	P06633	220 aa		3.97	□□□□□ -1.77
NMD3	YHR170W	MRP1	P10662	321 aa	Known RBP	3.97	□□□□□ -1.77
NMD3	YHR170W	SAG1	P20840	650 aa		3.97	□□□□□ -1.77
NMD3	YHR170W	AIM17	P23180	465 aa	Known RBP	3.97	□□□□□ -1.77
NMD3	YHR170W	LDB16	P25587	256 aa		3.97	□□□□□ -1.77
NMD3	YHR170W	PTC6	P25646	442 aa		3.97	□□□□□ -1.77
NMD3	YHR170W	HOM6	P31116	359 aa	Known RBP	3.97	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms