RNA–Protein interactions for RNA: YGR135W

PRE9, Transcript of Alpha 3 subunit of the 20S proteasome, yeastyeast

Gene PRE9, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE9YGR135W CDC13P32797 924 aaKnown RBP3.84□□□□□ -1.79
PRE9YGR135W CSE2P33308 149 aa3.84□□□□□ -1.79
PRE9YGR135W YKL162CP36052 402 aa3.84□□□□□ -1.79
PRE9YGR135W YHL026CP38740 315 aa3.84□□□□□ -1.79
PRE9YGR135W YEL073CP39974 107 aa3.84□□□□□ -1.79
PRE9YGR135W YER079WP40052 210 aaKnown RBP3.84□□□□□ -1.79
PRE9YGR135W BMT5P40493 336 aa3.84□□□□□ -1.79
PRE9YGR135W YIR016WP40572 265 aa3.84□□□□□ -1.79
PRE9YGR135W SNM1P40993 198 aa3.84□□□□□ -1.79
PRE9YGR135W CAT5P41735 233 aa3.84□□□□□ -1.79
PRE9YGR135W PRM10P42946 383 aa3.84□□□□□ -1.79
PRE9YGR135W MRX5P47007 382 aa3.84□□□□□ -1.79
PRE9YGR135W LOH1P47055 219 aa3.84□□□□□ -1.79
PRE9YGR135W YJR030CP47101 745 aa3.84□□□□□ -1.79
PRE9YGR135W MCM22P47167 239 aa3.84□□□□□ -1.79
PRE9YGR135W SDT1P53078 280 aa3.84□□□□□ -1.79
PRE9YGR135W PAU12P53343 120 aa3.84□□□□□ -1.79
PRE9YGR135W MNT4P53745 580 aa3.84□□□□□ -1.79
PRE9YGR135W ASI3P53983 676 aa3.84□□□□□ -1.79
PRE9YGR135W SWF1Q04629 336 aa3.84□□□□□ -1.79
PRE9YGR135W RRN11Q04712 507 aa3.84□□□□□ -1.79
PRE9YGR135W KEI1Q06346 221 aa3.84□□□□□ -1.79
PRE9YGR135W YLR036CQ07986 203 aa3.84□□□□□ -1.79
PRE9YGR135W ZEO1Q08245 113 aa3.84□□□□□ -1.79
PRE9YGR135W RDL1Q12305 139 aaKnown RBP3.84□□□□□ -1.79
PRE9YGR135W FRE7Q12333 620 aa3.84□□□□□ -1.79
PRE9YGR135W RDI1Q12434 202 aa3.84□□□□□ -1.79
PRE9YGR135W REV1P12689 985 aa3.83□□□□□ -1.8
PRE9YGR135W ERD1P16151 362 aa3.83□□□□□ -1.8
PRE9YGR135W SEC22P22214 214 aa3.83□□□□□ -1.8
PRE9YGR135W FUN26P31381 517 aa3.83□□□□□ -1.8
PRE9YGR135W HMX1P32339 317 aa3.83□□□□□ -1.8
PRE9YGR135W MKK1P32490 508 aa3.83□□□□□ -1.8
PRE9YGR135W KKQ8P36004 724 aa3.83□□□□□ -1.8
PRE9YGR135W YPT52P36018 234 aaKnown RBP3.83□□□□□ -1.8
PRE9YGR135W PAU24P38155 120 aa3.83□□□□□ -1.8
PRE9YGR135W ERV15P38312 142 aa3.83□□□□□ -1.8
PRE9YGR135W PRS3P38689 320 aaKnown RBP3.83□□□□□ -1.8
PRE9YGR135W TIM17P39515 158 aa3.83□□□□□ -1.8
PRE9YGR135W AIM2P39721 246 aa3.83□□□□□ -1.8
PRE9YGR135W GCV3P39726 170 aaPredicted RBP3.83□□□□□ -1.8
PRE9YGR135W RFC2P40348 353 aa3.83□□□□□ -1.8
PRE9YGR135W PGD1P40356 397 aa3.83□□□□□ -1.8
PRE9YGR135W NSE4P43124 402 aa3.83□□□□□ -1.8
PRE9YGR135W YJL016WP47072 561 aa3.83□□□□□ -1.8
PRE9YGR135W MOG1P47123 218 aa3.83□□□□□ -1.8
PRE9YGR135W PRP24P49960 444 aaKnown RBP3.83□□□□□ -1.8
PRE9YGR135W PHB2P50085 310 aa3.83□□□□□ -1.8
PRE9YGR135W DOC1P53068 250 aa3.83□□□□□ -1.8
PRE9YGR135W PKP2P53170 491 aa3.83□□□□□ -1.8
PRE9YGR135W YGR015CP53208 328 aa3.83□□□□□ -1.8
PRE9YGR135W SYF2P53277 215 aaPredicted RBP3.83□□□□□ -1.8
PRE9YGR135W FRE4P53746 719 aa3.83□□□□□ -1.8
PRE9YGR135W YNL260CP53846 198 aa3.83□□□□□ -1.8
PRE9YGR135W YCL001W-AP87012 153 aa3.83□□□□□ -1.8
PRE9YGR135W CAB5Q03941 241 aa3.83□□□□□ -1.8
PRE9YGR135W CAC2Q04199 468 aa3.83□□□□□ -1.8
PRE9YGR135W YMR252CQ04814 134 aa3.83□□□□□ -1.8
PRE9YGR135W YPR127WQ06494 345 aa3.83□□□□□ -1.8
PRE9YGR135W YLR012CQ07927 99 aa3.83□□□□□ -1.8
PRE9YGR135W REX4Q08237 289 aa3.83□□□□□ -1.8
PRE9YGR135W RRP40Q08285 240 aaKnown RBP3.83□□□□□ -1.8
PRE9YGR135W SCP1Q08873 200 aa3.83□□□□□ -1.8
PRE9YGR135W TMS1Q12116 473 aa3.83□□□□□ -1.8
PRE9YGR135W YPR011CQ12251 326 aa3.83□□□□□ -1.8
PRE9YGR135W PCL9Q12477 304 aa3.83□□□□□ -1.8
PRE9YGR135W YPR145C-AQ2V2P0 78 aa3.83□□□□□ -1.8
PRE9YGR135W HAP2P06774 265 aa3.82□□□□□ -1.8
PRE9YGR135W PRB1P09232 635 aa3.82□□□□□ -1.8
PRE9YGR135W ZWF1P11412 505 aaKnown RBP3.82□□□□□ -1.8
PRE9YGR135W SEC62P21825 274 aa3.82□□□□□ -1.8
PRE9YGR135W TRX3P25372 127 aa3.82□□□□□ -1.8
PRE9YGR135W MRP17P28778 131 aa3.82□□□□□ -1.8
PRE9YGR135W ATS1P31386 333 aa3.82□□□□□ -1.8
PRE9YGR135W VMA5P31412 392 aaKnown RBP3.82□□□□□ -1.8
PRE9YGR135W DOA4P32571 926 aa3.82□□□□□ -1.8
PRE9YGR135W PPZ2P33329 710 aa3.82□□□□□ -1.8
PRE9YGR135W SKN1P33336 771 aa3.82□□□□□ -1.8
PRE9YGR135W PRP18P33411 251 aaPredicted RBP3.82□□□□□ -1.8
PRE9YGR135W ECT1P33412 323 aa3.82□□□□□ -1.8
PRE9YGR135W SFK1P35735 353 aa3.82□□□□□ -1.8
PRE9YGR135W YKL070WP36087 169 aa3.82□□□□□ -1.8
PRE9YGR135W MTC4P38335 694 aaKnown RBP3.82□□□□□ -1.8
PRE9YGR135W PRS2P38620 318 aaKnown RBP3.82□□□□□ -1.8
PRE9YGR135W RMD6P39975 231 aa3.82□□□□□ -1.8
PRE9YGR135W YIR035CP40579 254 aa3.82□□□□□ -1.8
PRE9YGR135W GNA1P43577 159 aaPredicted RBP3.82□□□□□ -1.8
PRE9YGR135W AIM24P47127 394 aa3.82□□□□□ -1.8
PRE9YGR135W IBA57P47158 497 aa3.82□□□□□ -1.8
PRE9YGR135W PAC10P48363 199 aa3.82□□□□□ -1.8
PRE9YGR135W MDM34P53083 459 aa3.82□□□□□ -1.8
PRE9YGR135W STD1Q02794 444 aa3.82□□□□□ -1.8
PRE9YGR135W SNO1Q03144 224 aa3.82□□□□□ -1.8
PRE9YGR135W ATC1Q04005 294 aa3.82□□□□□ -1.8
PRE9YGR135W BOP2Q06150 570 aa3.82□□□□□ -1.8
PRE9YGR135W PFA4Q12006 378 aa3.82□□□□□ -1.8
PRE9YGR135W PER33Q12144 273 aa3.82□□□□□ -1.8
PRE9YGR135W PEX11Q12462 236 aa3.82□□□□□ -1.8
PRE9YGR135W SPO24Q3E752 67 aa3.82□□□□□ -1.8
PRE9YGR135W CMC2Q3E7A4 109 aa3.82□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 55.4 ms