RNA–Protein interactions for RNA: YGL155W

CDC43, Transcript of Beta subunit of geranylgeranyltransferase type I, yeastyeast

Gene CDC43, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC43YGL155W YGR045CP53229 120 aa4.81□□□□□ -1.64
CDC43YGL155W OKP1P53298 406 aa4.81□□□□□ -1.64
CDC43YGL155W HHO1P53551 258 aa4.81□□□□□ -1.64
CDC43YGL155W SAM50P53969 484 aa4.81□□□□□ -1.64
CDC43YGL155W ACT1P60010 375 aaKnown RBP4.81□□□□□ -1.64
CDC43YGL155W BUD25P85052 153 aa4.81□□□□□ -1.64
CDC43YGL155W YML018CQ03730 393 aa4.81□□□□□ -1.64
CDC43YGL155W RVB1Q03940 463 aaKnown RBP4.81□□□□□ -1.64
CDC43YGL155W CAB5Q03941 241 aa4.81□□□□□ -1.64
CDC43YGL155W BNA5Q05979 453 aa4.81□□□□□ -1.64
CDC43YGL155W YRM1Q12340 786 aa4.81□□□□□ -1.64
CDC43YGL155W PCC1Q3E833 88 aa4.81□□□□□ -1.64
CDC43YGL155W MEX67Q99257 599 aaKnown RBP4.81□□□□□ -1.64
CDC43YGL155W SCEIP03882 235 aa4.8□□□□□ -1.64
CDC43YGL155W UBI4P0CG63 381 aaKnown RBP4.8□□□□□ -1.64
CDC43YGL155W RPL40AP0CH08 128 aaKnown RBP4.8□□□□□ -1.64
CDC43YGL155W RPL40BP0CH09 128 aaKnown RBP4.8□□□□□ -1.64
CDC43YGL155W STE18P18852 110 aa4.8□□□□□ -1.64
CDC43YGL155W SEC22P22214 214 aa4.8□□□□□ -1.64
CDC43YGL155W ERG4P25340 473 aa4.8□□□□□ -1.64
CDC43YGL155W PMT2P31382 759 aa4.8□□□□□ -1.64
CDC43YGL155W MRPL15P36523 253 aa4.8□□□□□ -1.64
CDC43YGL155W ECM31P38122 312 aa4.8□□□□□ -1.64
CDC43YGL155W UMP1P38293 148 aa4.8□□□□□ -1.64
CDC43YGL155W CHS7P38843 316 aa4.8□□□□□ -1.64
CDC43YGL155W IKI1P38874 309 aa4.8□□□□□ -1.64
CDC43YGL155W PIC2P40035 300 aa4.8□□□□□ -1.64
CDC43YGL155W PGD1P40356 397 aa4.8□□□□□ -1.64
CDC43YGL155W EMC5P40540 141 aa4.8□□□□□ -1.64
CDC43YGL155W NAS2P40555 220 aa4.8□□□□□ -1.64
CDC43YGL155W YIR035CP40579 254 aa4.8□□□□□ -1.64
CDC43YGL155W IRC24P40580 263 aa4.8□□□□□ -1.64
CDC43YGL155W ERJ5P43613 295 aaPredicted RBP4.8□□□□□ -1.64
CDC43YGL155W CIS3P47001 227 aa4.8□□□□□ -1.64
CDC43YGL155W PMT3P47190 753 aa4.8□□□□□ -1.64
CDC43YGL155W NIT3P49954 291 aa4.8□□□□□ -1.64
CDC43YGL155W BRR6P53062 197 aa4.8□□□□□ -1.64
CDC43YGL155W NIF3P53081 288 aa4.8□□□□□ -1.64
CDC43YGL155W YIP4P53093 235 aa4.8□□□□□ -1.64
CDC43YGL155W ERV25P54837 211 aaKnown RBP4.8□□□□□ -1.64
CDC43YGL155W YDR248CQ03786 193 aa4.8□□□□□ -1.64
CDC43YGL155W PAL1Q05518 499 aaKnown RBP4.8□□□□□ -1.64
CDC43YGL155W DIC1Q06143 298 aa4.8□□□□□ -1.64
CDC43YGL155W GRC3Q07845 632 aa4.8□□□□□ -1.64
CDC43YGL155W MIM1Q08176 113 aa4.8□□□□□ -1.64
CDC43YGL155W MED7Q08278 222 aa4.8□□□□□ -1.64
CDC43YGL155W VAM3Q12241 283 aa4.8□□□□□ -1.64
CDC43YGL155W MCT1Q12283 360 aa4.8□□□□□ -1.64
CDC43YGL155W YOR343CQ12484 108 aa4.8□□□□□ -1.64
CDC43YGL155W RPL1AP0CX43 217 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W RPL1BP0CX44 217 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W ARF1P11076 181 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W RPB8P20436 146 aa4.79□□□□□ -1.64
CDC43YGL155W NFS1P25374 497 aa4.79□□□□□ -1.64
CDC43YGL155W TIP1P27654 210 aaPredicted RBP4.79□□□□□ -1.64
CDC43YGL155W ERG3P32353 365 aa4.79□□□□□ -1.64
CDC43YGL155W MCM10P32354 571 aa4.79□□□□□ -1.64
CDC43YGL155W NRP1P32770 719 aaKnown RBP RIP-Chip data4.79□□□□□ -1.64not detected
CDC43YGL155W FMT1P32785 401 aa4.79□□□□□ -1.64
CDC43YGL155W COS9P36034 407 aa4.79□□□□□ -1.64
CDC43YGL155W YKL162CP36052 402 aa4.79□□□□□ -1.64
CDC43YGL155W FRM2P37261 193 aa4.79□□□□□ -1.64
CDC43YGL155W POG1P40473 351 aa4.79□□□□□ -1.64
CDC43YGL155W YIL024CP40543 189 aa4.79□□□□□ -1.64
CDC43YGL155W CAF16P43569 289 aa4.79□□□□□ -1.64
CDC43YGL155W YHC3P47040 408 aa4.79□□□□□ -1.64
CDC43YGL155W MOG1P47123 218 aa4.79□□□□□ -1.64
CDC43YGL155W UFD1P53044 361 aa4.79□□□□□ -1.64
CDC43YGL155W LCL3P53153 274 aa4.79□□□□□ -1.64
CDC43YGL155W ELA1P53861 379 aaPredicted RBP4.79□□□□□ -1.64
CDC43YGL155W ALG9P53868 555 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W FMP41P53889 259 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W AAH1P53909 347 aa4.79□□□□□ -1.64
CDC43YGL155W TPP1Q03796 238 aa4.79□□□□□ -1.64
CDC43YGL155W STP3Q05937 343 aa4.79□□□□□ -1.64
CDC43YGL155W DXO1Q06349 442 aa4.79□□□□□ -1.64
CDC43YGL155W SYM1Q06563 197 aa4.79□□□□□ -1.64
CDC43YGL155W BER1Q06688 274 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W HEM25Q07534 307 aa4.79□□□□□ -1.64
CDC43YGL155W SDO1Q07953 250 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W SCP1Q08873 200 aa4.79□□□□□ -1.64
CDC43YGL155W PAR32Q12515 295 aaKnown RBP4.79□□□□□ -1.64
CDC43YGL155W YLR146W-AQ2V2P1 62 aa4.79□□□□□ -1.64
CDC43YGL155W YJR112W-AQ3E743 109 aa4.79□□□□□ -1.64
CDC43YGL155W VMA9Q3E7B6 73 aa4.79□□□□□ -1.64
CDC43YGL155W HBN1Q96VH4 193 aa4.79□□□□□ -1.64
CDC43YGL155W CYC7P00045 113 aa4.78□□□□□ -1.64
CDC43YGL155W TPI1P00942 248 aaKnown RBP4.78□□□□□ -1.64
CDC43YGL155W GLK1P17709 500 aaKnown RBP4.78□□□□□ -1.64
CDC43YGL155W STP22P25604 385 aa4.78□□□□□ -1.64
CDC43YGL155W EHD3P28817 500 aa4.78□□□□□ -1.64
CDC43YGL155W VMA5P31412 392 aaKnown RBP4.78□□□□□ -1.64
CDC43YGL155W MSK1P32048 576 aa4.78□□□□□ -1.64
CDC43YGL155W POP8P38208 133 aa4.78□□□□□ -1.64
CDC43YGL155W PRS3P38689 320 aaKnown RBP4.78□□□□□ -1.64
CDC43YGL155W MRX5P47007 382 aa4.78□□□□□ -1.64
CDC43YGL155W TRM9P49957 279 aa4.78□□□□□ -1.64
CDC43YGL155W HSV2P50079 448 aaPredicted RBP4.78□□□□□ -1.64
CDC43YGL155W YGL117WP53133 265 aa4.78□□□□□ -1.64
CDC43YGL155W PKP2P53170 491 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms