RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C HNM1P19807 563 aa5.01□□□□□ -1.61
SEC20YDR498C KRR1P25586 316 aaPredicted RBP5.01□□□□□ -1.61
SEC20YDR498C CPR3P25719 182 aa5.01□□□□□ -1.61
SEC20YDR498C SNC2P33328 115 aa5.01□□□□□ -1.61
SEC20YDR498C SOF1P33750 489 aaKnown RBP5.01□□□□□ -1.61
SEC20YDR498C SRY1P36007 326 aa5.01□□□□□ -1.61
SEC20YDR498C UBS1P38290 277 aa5.01□□□□□ -1.61
SEC20YDR498C AVT7P40501 490 aa5.01□□□□□ -1.61
SEC20YDR498C SYS1P41544 203 aa5.01□□□□□ -1.61
SEC20YDR498C ERJ5P43613 295 aaPredicted RBP5.01□□□□□ -1.61
SEC20YDR498C CTK2P46962 323 aa5.01□□□□□ -1.61
SEC20YDR498C IKS1P47042 667 aa5.01□□□□□ -1.61
SEC20YDR498C GPG1P53130 126 aa5.01□□□□□ -1.61
SEC20YDR498C PBP1P53297 722 aaKnown RBP5.01□□□□□ -1.61
SEC20YDR498C MRPL50P53724 139 aa5.01□□□□□ -1.61
SEC20YDR498C RNH201P53942 307 aa5.01□□□□□ -1.61
SEC20YDR498C MRP51Q02950 344 aa5.01□□□□□ -1.61
SEC20YDR498C NUP53Q03790 475 aa5.01□□□□□ -1.61
SEC20YDR498C SYM1Q06563 197 aa5.01□□□□□ -1.61
SEC20YDR498C YLR031WQ07978 186 aa5.01□□□□□ -1.61
SEC20YDR498C YNG1Q08465 219 aa5.01□□□□□ -1.61
SEC20YDR498C HNT3Q08702 217 aa5.01□□□□□ -1.61
SEC20YDR498C FRE3Q08905 711 aa5.01□□□□□ -1.61
SEC20YDR498C FEX2Q08991 375 aa5.01□□□□□ -1.61
SEC20YDR498C ATP14Q12349 124 aa5.01□□□□□ -1.61
SEC20YDR498C ISA2Q12425 185 aa5.01□□□□□ -1.61
SEC20YDR498C TEL1P38110 2787 aa5.01□□□□□ -1.61
SEC20YDR498C AAC1P04710 309 aa5□□□□□ -1.61
SEC20YDR498C ARG80P07249 177 aa5□□□□□ -1.61
SEC20YDR498C PHO2P07269 559 aa5□□□□□ -1.61
SEC20YDR498C SEC22P22214 214 aa5□□□□□ -1.61
SEC20YDR498C ERG8P24521 451 aa5□□□□□ -1.61
SEC20YDR498C YCR016WP25617 290 aaKnown RBP5□□□□□ -1.61
SEC20YDR498C VMA5P31412 392 aaKnown RBP5□□□□□ -1.61
SEC20YDR498C ACB1P31787 87 aa5□□□□□ -1.61
SEC20YDR498C VAM7P32912 316 aa5□□□□□ -1.61
SEC20YDR498C VMA7P39111 118 aa5□□□□□ -1.61
SEC20YDR498C PHM8P40025 321 aa5□□□□□ -1.61
SEC20YDR498C SER3P40054 469 aa5□□□□□ -1.61
SEC20YDR498C DLS1P40366 167 aa5□□□□□ -1.61
SEC20YDR498C ADO1P47143 340 aaKnown RBP5□□□□□ -1.61
SEC20YDR498C ECL1P48235 211 aa5□□□□□ -1.61
SEC20YDR498C YGL159WP53110 370 aa5□□□□□ -1.61
SEC20YDR498C MTM1P53320 366 aa5□□□□□ -1.61
SEC20YDR498C HHT1P61830 136 aa5□□□□□ -1.61
SEC20YDR498C CTF19Q02732 369 aa5□□□□□ -1.61
SEC20YDR498C KAP120Q02932 1032 aa5□□□□□ -1.61
SEC20YDR498C COQ11Q05892 277 aa5□□□□□ -1.61
SEC20YDR498C FEX1Q08913 375 aa5□□□□□ -1.61
SEC20YDR498C SCEIP03882 235 aa4.99□□□□□ -1.61
SEC20YDR498C URA3P03962 267 aa4.99□□□□□ -1.61
SEC20YDR498C URA6P15700 204 aa4.99□□□□□ -1.61
SEC20YDR498C RFA1P22336 621 aaKnown RBP4.99□□□□□ -1.61
SEC20YDR498C HXT2P23585 541 aa4.99□□□□□ -1.61
SEC20YDR498C SED4P25365 1065 aa4.99□□□□□ -1.61
SEC20YDR498C YCR061WP25639 631 aa4.99□□□□□ -1.61
SEC20YDR498C UMP1P38293 148 aa4.99□□□□□ -1.61
SEC20YDR498C INN1P53901 409 aa4.99□□□□□ -1.61
SEC20YDR498C ARG5,6Q01217 863 aa4.99□□□□□ -1.61
SEC20YDR498C GRC3Q07845 632 aa4.99□□□□□ -1.61
SEC20YDR498C MCT1Q12283 360 aa4.99□□□□□ -1.61
SEC20YDR498C YOR032W-AQ8TGS1 66 aa4.99□□□□□ -1.61
SEC20YDR498C FSH3Q99369 266 aa4.99□□□□□ -1.61
SEC20YDR498C RPL40AP0CH08 128 aaKnown RBP4.98□□□□□ -1.61
SEC20YDR498C RPL40BP0CH09 128 aaKnown RBP4.98□□□□□ -1.61
SEC20YDR498C MRS4P23500 304 aa4.98□□□□□ -1.61
SEC20YDR498C CPR4P25334 318 aa4.98□□□□□ -1.61
SEC20YDR498C ADH7P25377 361 aa4.98□□□□□ -1.61
SEC20YDR498C MRP17P28778 131 aa4.98□□□□□ -1.61
SEC20YDR498C SUA5P32579 426 aa4.98□□□□□ -1.61
SEC20YDR498C EMP24P32803 203 aaKnown RBP4.98□□□□□ -1.61
SEC20YDR498C PPZ2P33329 710 aa4.98□□□□□ -1.61
SEC20YDR498C MRPL36P36531 177 aa4.98□□□□□ -1.61
SEC20YDR498C FIG1P38224 298 aa4.98□□□□□ -1.61
SEC20YDR498C GWT1P47026 490 aa4.98□□□□□ -1.61
SEC20YDR498C LOH1P47055 219 aa4.98□□□□□ -1.61
SEC20YDR498C UBP8P50102 471 aa4.98□□□□□ -1.61
SEC20YDR498C RSM27P53305 110 aa4.98□□□□□ -1.61
SEC20YDR498C HAS1Q03532 505 aaKnown RBP4.98□□□□□ -1.61
SEC20YDR498C NCE102Q12207 173 aaRIP-Chip data4.98□□□□□ -1.61not detected
SEC20YDR498C NOP56Q12460 504 aaKnown RBP RIP-Chip data4.98□□□□□ -1.61not detected
SEC20YDR498C HUT1Q12520 339 aa4.98□□□□□ -1.61
SEC20YDR498C MSW1P04803 379 aa4.97□□□□□ -1.61
SEC20YDR498C YFR010W-AP0C5N0 62 aa4.97□□□□□ -1.61
SEC20YDR498C RPS16AP0CX51 143 aaKnown RBP4.97□□□□□ -1.61
SEC20YDR498C RPS16BP0CX52 143 aaKnown RBP4.97□□□□□ -1.61
SEC20YDR498C PDX1P16451 410 aa4.97□□□□□ -1.61
SEC20YDR498C LDB16P25587 256 aa4.97□□□□□ -1.61
SEC20YDR498C TRR1P29509 319 aaKnown RBP4.97□□□□□ -1.61
SEC20YDR498C AFG1P32317 509 aa4.97□□□□□ -1.61
SEC20YDR498C MSS1P32559 526 aaPredicted RBP4.97□□□□□ -1.61
SEC20YDR498C MRPS5P33759 307 aa4.97□□□□□ -1.61
SEC20YDR498C PAN3P36102 679 aaPredicted RBP4.97□□□□□ -1.61
SEC20YDR498C MGE1P38523 228 aa4.97□□□□□ -1.61
SEC20YDR498C YND1P40009 630 aa4.97□□□□□ -1.61
SEC20YDR498C SLZ1P40167 298 aa4.97□□□□□ -1.61
SEC20YDR498C SNX4P47057 423 aa4.97□□□□□ -1.61
SEC20YDR498C TAD2P47058 250 aa4.97□□□□□ -1.61
SEC20YDR498C YJR111CP47148 283 aaKnown RBP4.97□□□□□ -1.61
SEC20YDR498C NIF3P53081 288 aa4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms