RNA–Protein interactions for RNA: YDR396W

YDR396W, Transcript of Dubious open reading frame unlikely to encode a functional protein, yeast

Gene YDR396W, Length 501 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR396W	YDR396W	BUD13	P46947	266 aa	Predicted RBP	4.95	□□□□□ -1.62
YDR396W	YDR396W	MCM22	P47167	239 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	MRPS35	P53292	345 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	AIM11	P87275	137 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	COF1	Q03048	143 aa	Known RBP	4.95	□□□□□ -1.62
YDR396W	YDR396W	RSC9	Q03124	581 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	SCS7	Q03529	384 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	CGI121	Q03705	181 aa	Known RBP	4.95	□□□□□ -1.62
YDR396W	YDR396W	AIM36	Q03798	255 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	PAL1	Q05518	499 aa	Known RBP	4.95	□□□□□ -1.62
YDR396W	YDR396W	YPR098C	Q06089	161 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	YPR202W	Q08993	238 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	IGO2	Q9P305	131 aa		4.95	□□□□□ -1.62
YDR396W	YDR396W	SIR4	P11978	1358 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	XRN1	P22147	1528 aa	Known RBP	4.94	□□□□□ -1.62
YDR396W	YDR396W	CYC7	P00045	113 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	OPI3	P05375	206 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	MBR1	P23493	339 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	CDC50	P25656	391 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	APE2	P32454	952 aa	Known RBP	4.94	□□□□□ -1.62
YDR396W	YDR396W	SEC17	P32602	292 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	UTR4	P32626	227 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	COX13	P32799	129 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	SNC2	P33328	115 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	FRE2	P36033	711 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	SKG1	P36169	355 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	MRPL3	P36516	390 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	NAT2	P37293	288 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	PEX7	P39108	375 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	YAL037W	P39728	267 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	SAS2	P40963	338 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	PMT5	P52867	743 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	COS10	P52924	374 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	FRE4	P53746	719 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	ERP1	Q05359	219 aa	Known RBP	4.94	□□□□□ -1.62
YDR396W	YDR396W	THP1	Q08231	455 aa		4.94	□□□□□ -1.62
YDR396W	YDR396W	YLR415C	O13578	112 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	RPL31A	P0C2H8	113 aa	Known RBP	4.93	□□□□□ -1.62
YDR396W	YDR396W	YOL163W	P0CF20	169 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	NUP1	P20676	1076 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	MIR1	P23641	311 aa	Known RBP	4.93	□□□□□ -1.62
YDR396W	YDR396W	POF1	P25576	258 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	SPT14	P32363	452 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	YOR062C	P36025	268 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	YKR073C	P36153	106 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	YHR112C	P38716	378 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	MDM31	P38880	579 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	LYS1	P38998	373 aa	RIP-Chip data	4.93	□□□□□ -1.62	not detected
YDR396W	YDR396W	YEA4	P40004	342 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	COQ5	P49017	307 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	TRM9	P49957	279 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	YGR039W	P53225	103 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	LST7	P53237	242 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	HHO1	P53551	258 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	HHT1	P61830	136 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	YDR366C	P87287	132 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	ELP3	Q02908	557 aa	Known RBP	4.93	□□□□□ -1.62
YDR396W	YDR396W	TSA2	Q04120	196 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	ASM4	Q05166	528 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	LIP2	Q06005	328 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	YPR114W	Q06107	315 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	SFH1	Q06168	426 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	MCH1	Q07376	486 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	YOR338W	Q99326	363 aa		4.93	□□□□□ -1.62
YDR396W	YDR396W	COX1	P00401	534 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	VAR1	P02381	398 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	MRS1	P07266	363 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YKR104W	P0CE69	306 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	MKK1	P32490	508 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	THI80	P35202	319 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	PRY2	P36110	329 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YBR056W	P38081	501 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YBR062C	P38239	180 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YEA6	P39953	335 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	GLR1	P41921	483 aa	Known RBP	4.92	□□□□□ -1.62
YDR396W	YDR396W	OST2	P46964	130 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	AVT4	P50944	713 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	PHO23	P50947	330 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	FLC3	P53121	802 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	MST27	P53176	234 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YGL039W	P53183	348 aa	Known RBP	4.92	□□□□□ -1.62
YDR396W	YDR396W	FHN1	P53279	174 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	HSK3	P69852	69 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YCL001W-A	P87012	153 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	ODC1	Q03028	310 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YMR320W	Q04897	101 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	YLR179C	Q06252	201 aa	Known RBP	4.92	□□□□□ -1.62
YDR396W	YDR396W	ASA1	Q06822	443 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	RPL7B	Q12213	244 aa	Known RBP	4.92	□□□□□ -1.62
YDR396W	YDR396W	AI5_ALPHA	Q9ZZX1	630 aa		4.92	□□□□□ -1.62
YDR396W	YDR396W	UBI4	P0CG63	381 aa	Known RBP	4.91	□□□□□ -1.62
YDR396W	YDR396W	RPL16B	P26785	198 aa	Known RBP	4.91	□□□□□ -1.62
YDR396W	YDR396W	CNE1	P27825	502 aa		4.91	□□□□□ -1.62
YDR396W	YDR396W	PEX4	P29340	183 aa		4.91	□□□□□ -1.62
YDR396W	YDR396W	LST4	P34239	828 aa		4.91	□□□□□ -1.62
YDR396W	YDR396W	YBR241C	P38142	488 aa		4.91	□□□□□ -1.62
YDR396W	YDR396W	DOG1	P38774	246 aa		4.91	□□□□□ -1.62
YDR396W	YDR396W	MED6	P38782	295 aa		4.91	□□□□□ -1.62
YDR396W	YDR396W	YPT35	P38815	214 aa	Known RBP	4.91	□□□□□ -1.62
YDR396W	YDR396W	PEX22	P39718	180 aa		4.91	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 209.7 ms