RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W STE18P18852 110 aa5.35□□□□□ -1.55
RPT3YDR394W CPR4P25334 318 aa5.35□□□□□ -1.55
RPT3YDR394W YCR061WP25639 631 aa5.35□□□□□ -1.55
RPT3YDR394W PPA2P28239 310 aa5.35□□□□□ -1.55
RPT3YDR394W CAM1P29547 415 aaKnown RBP5.35□□□□□ -1.55
RPT3YDR394W SEF1P34228 1148 aa5.35□□□□□ -1.55
RPT3YDR394W UTH1P36135 365 aa5.35□□□□□ -1.55
RPT3YDR394W FRM2P37261 193 aa5.35□□□□□ -1.55
RPT3YDR394W YPC1P38298 316 aa5.35□□□□□ -1.55
RPT3YDR394W ARO9P38840 513 aaPredicted RBP5.35□□□□□ -1.55
RPT3YDR394W IDP2P41939 412 aa5.35□□□□□ -1.55
RPT3YDR394W OTU1P43558 301 aa5.35□□□□□ -1.55
RPT3YDR394W ERJ5P43613 295 aaPredicted RBP5.35□□□□□ -1.55
RPT3YDR394W BXI1P48558 297 aa5.35□□□□□ -1.55
RPT3YDR394W YIP4P53093 235 aa5.35□□□□□ -1.55
RPT3YDR394W TIM11P81449 96 aaPredicted RBP5.35□□□□□ -1.55
RPT3YDR394W ARG5,6Q01217 863 aa5.35□□□□□ -1.55
RPT3YDR394W LAP3Q01532 483 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
RPT3YDR394W PET191Q02772 108 aa5.35□□□□□ -1.55
RPT3YDR394W PEX25Q02969 394 aa5.35□□□□□ -1.55
RPT3YDR394W HNT1Q04344 158 aaKnown RBP5.35□□□□□ -1.55
RPT3YDR394W YLR456WQ06199 204 aa5.35□□□□□ -1.55
RPT3YDR394W YLR352WQ06479 807 aa5.35□□□□□ -1.55
RPT3YDR394W NIP7Q08962 181 aaKnown RBP5.35□□□□□ -1.55
RPT3YDR394W GRE1Q08969 168 aa5.35□□□□□ -1.55
RPT3YDR394W RRI1Q12468 440 aa5.35□□□□□ -1.55
RPT3YDR394W YGL194C-AQ2V2P6 80 aa5.35□□□□□ -1.55
RPT3YDR394W BEM2P39960 2167 aaKnown RBP5.35□□□□□ -1.55
RPT3YDR394W HXT2P23585 541 aa5.34□□□□□ -1.55
RPT3YDR394W ERG4P25340 473 aa5.34□□□□□ -1.55
RPT3YDR394W KRR1P25586 316 aaPredicted RBP5.34□□□□□ -1.55
RPT3YDR394W SUA5P32579 426 aa5.34□□□□□ -1.55
RPT3YDR394W APD1P38281 316 aa5.34□□□□□ -1.55
RPT3YDR394W YHR210CP38893 341 aa5.34□□□□□ -1.55
RPT3YDR394W BMT5P40493 336 aa5.34□□□□□ -1.55
RPT3YDR394W BUD8P41698 603 aa5.34□□□□□ -1.55
RPT3YDR394W CIN2P46670 268 aa5.34□□□□□ -1.55
RPT3YDR394W YGR066CP53242 292 aa5.34□□□□□ -1.55
RPT3YDR394W YGR126WP53274 230 aa5.34□□□□□ -1.55
RPT3YDR394W YPL039WQ03080 316 aa5.34□□□□□ -1.55
RPT3YDR394W RVB1Q03940 463 aaKnown RBP5.34□□□□□ -1.55
RPT3YDR394W SRL2Q12020 392 aa5.34□□□□□ -1.55
RPT3YDR394W FRE7Q12333 620 aa5.34□□□□□ -1.55
RPT3YDR394W ATP14Q12349 124 aa5.34□□□□□ -1.55
RPT3YDR394W PRB1P09232 635 aa5.33□□□□□ -1.56
RPT3YDR394W NAM2P11325 894 aa5.33□□□□□ -1.56
RPT3YDR394W SPO7P18410 259 aa5.33□□□□□ -1.56
RPT3YDR394W ADH7P25377 361 aa5.33□□□□□ -1.56
RPT3YDR394W TRR1P29509 319 aaKnown RBP5.33□□□□□ -1.56
RPT3YDR394W BFR1P38934 470 aaKnown RBP RIP-Chip data5.33□□□□□ -1.56not detected
RPT3YDR394W YER010CP40011 234 aa5.33□□□□□ -1.56
RPT3YDR394W PUG1P40100 303 aa5.33□□□□□ -1.56
RPT3YDR394W SLZ1P40167 298 aa5.33□□□□□ -1.56
RPT3YDR394W CUP9P41817 306 aa5.33□□□□□ -1.56
RPT3YDR394W PHB2P50085 310 aa5.33□□□□□ -1.56
RPT3YDR394W AAH1P53909 347 aa5.33□□□□□ -1.56
RPT3YDR394W NRK1P53915 240 aa5.33□□□□□ -1.56
RPT3YDR394W BUD25P85052 153 aa5.33□□□□□ -1.56
RPT3YDR394W TIM44Q01852 431 aa5.33□□□□□ -1.56
RPT3YDR394W SRP1Q02821 542 aaKnown RBP5.33□□□□□ -1.56
RPT3YDR394W ANT1Q06497 328 aa5.33□□□□□ -1.56
RPT3YDR394W HEM25Q07534 307 aa5.33□□□□□ -1.56
RPT3YDR394W RDL2Q08742 149 aaKnown RBP5.33□□□□□ -1.56
RPT3YDR394W MCT1Q12283 360 aa5.33□□□□□ -1.56
RPT3YDR394W HMS1Q12398 434 aa5.33□□□□□ -1.56
RPT3YDR394W TFB5Q3E7C1 72 aaPredicted RBP5.33□□□□□ -1.56
RPT3YDR394W YOR032W-AQ8TGS1 66 aa5.33□□□□□ -1.56
RPT3YDR394W PET20Q99373 253 aa5.33□□□□□ -1.56
RPT3YDR394W YAL064W-BO13512 126 aa5.32□□□□□ -1.56
RPT3YDR394W HNM1P19807 563 aa5.32□□□□□ -1.56
RPT3YDR394W CPR3P25719 182 aa5.32□□□□□ -1.56
RPT3YDR394W RFA3P26755 122 aaKnown RBP5.32□□□□□ -1.56
RPT3YDR394W FMT1P32785 401 aa5.32□□□□□ -1.56
RPT3YDR394W PPZ2P33329 710 aa5.32□□□□□ -1.56
RPT3YDR394W PAN3P36102 679 aaPredicted RBP5.32□□□□□ -1.56
RPT3YDR394W UMP1P38293 148 aa5.32□□□□□ -1.56
RPT3YDR394W TIR3P40552 269 aa5.32□□□□□ -1.56
RPT3YDR394W PHO23P50947 330 aa5.32□□□□□ -1.56
RPT3YDR394W NRM1P53718 249 aa5.32□□□□□ -1.56
RPT3YDR394W VBA4Q04602 768 aaKnown RBP5.32□□□□□ -1.56
RPT3YDR394W NOC4Q06512 552 aaPredicted RBP5.32□□□□□ -1.56
RPT3YDR394W SYM1Q06563 197 aa5.32□□□□□ -1.56
RPT3YDR394W YLR108CQ12259 485 aa5.32□□□□□ -1.56
RPT3YDR394W YRM1Q12340 786 aa5.32□□□□□ -1.56
RPT3YDR394W SWM1Q12379 170 aa5.32□□□□□ -1.56
RPT3YDR394W YIL046W-AQ3E7Z4 54 aa5.32□□□□□ -1.56
RPT3YDR394W AAC1P04710 309 aa5.31□□□□□ -1.56
RPT3YDR394W YHR214C-DP0CX93 97 aa5.31□□□□□ -1.56
RPT3YDR394W IFM1P25038 676 aa5.31□□□□□ -1.56
RPT3YDR394W MCM10P32354 571 aa5.31□□□□□ -1.56
RPT3YDR394W ARO4P32449 370 aaKnown RBP5.31□□□□□ -1.56
RPT3YDR394W PDC2P32896 925 aa5.31□□□□□ -1.56
RPT3YDR394W MRPL36P36531 177 aa5.31□□□□□ -1.56
RPT3YDR394W COS8P38723 381 aa5.31□□□□□ -1.56
RPT3YDR394W GLR1P41921 483 aaKnown RBP5.31□□□□□ -1.56
RPT3YDR394W TAD2P47058 250 aa5.31□□□□□ -1.56
RPT3YDR394W PGU1P47180 361 aa5.31□□□□□ -1.56
RPT3YDR394W NIT3P49954 291 aa5.31□□□□□ -1.56
RPT3YDR394W HSV2P50079 448 aaPredicted RBP5.31□□□□□ -1.56
RPT3YDR394W NIF3P53081 288 aa5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms