RNA–Protein interactions for RNA: YDR240C

SNU56, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU56, Length 1,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU56YDR240C BMT5P40493 336 aa1.17□□□□□ -2.22
SNU56YDR240C CTR3Q06686 241 aa1.17□□□□□ -2.22
SNU56YDR240C YBL008W-AQ3E821 79 aa1.17□□□□□ -2.22
SNU56YDR240C STF1P01098 86 aa1.16□□□□□ -2.22
SNU56YDR240C YKR045CP36138 183 aa1.16□□□□□ -2.22
SNU56YDR240C SSH1P38353 490 aaKnown RBP1.16□□□□□ -2.22
SNU56YDR240C DSE2P38844 325 aa1.16□□□□□ -2.22
SNU56YDR240C MAL13P53338 473 aa1.16□□□□□ -2.22
SNU56YDR240C YPR011CQ12251 326 aa1.16□□□□□ -2.22
SNU56YDR240C YGL010WP25338 174 aa1.15□□□□□ -2.23
SNU56YDR240C PHO88P38264 188 aaPredicted RBP1.15□□□□□ -2.23
SNU56YDR240C DSN1P40568 576 aa1.15□□□□□ -2.23
SNU56YDR240C FMP33P46998 180 aa1.15□□□□□ -2.23
SNU56YDR240C YDR124WQ04608 324 aa1.15□□□□□ -2.23
SNU56YDR240C BBP1Q12365 385 aa1.15□□□□□ -2.23
SNU56YDR240C SNF8Q12483 233 aa1.15□□□□□ -2.23
SNU56YDR240C YHR032W-AP0C5N6 59 aa1.14□□□□□ -2.23
SNU56YDR240C YHR125WP38831 101 aa1.14□□□□□ -2.23
SNU56YDR240C YER189WP40104 122 aa1.14□□□□□ -2.23
SNU56YDR240C YGL185CP53100 379 aa1.14□□□□□ -2.23
SNU56YDR240C ATO3Q12359 275 aa1.14□□□□□ -2.23
SNU56YDR240C YIL002W-AQ3E7Z5 69 aa1.14□□□□□ -2.23
SNU56YDR240C YLR462WO13556 202 aa1.13□□□□□ -2.23
SNU56YDR240C COX5AP00424 153 aa1.13□□□□□ -2.23
SNU56YDR240C MET16P18408 261 aaPredicted RBP1.13□□□□□ -2.23
SNU56YDR240C MRPL40P36534 297 aa1.13□□□□□ -2.23
SNU56YDR240C YHR022CP38763 256 aa1.13□□□□□ -2.23
SNU56YDR240C YEL075CP39972 122 aa1.13□□□□□ -2.23
SNU56YDR240C AVT2P39981 480 aa1.13□□□□□ -2.23
SNU56YDR240C DDI1P40087 428 aa1.13□□□□□ -2.23
SNU56YDR240C CYT2Q00873 224 aa1.13□□□□□ -2.23
SNU56YDR240C SPP2Q02521 185 aa1.13□□□□□ -2.23
SNU56YDR240C FAR8Q05040 523 aa1.13□□□□□ -2.23
SNU56YDR240C GMC2Q06201 188 aa1.13□□□□□ -2.23
SNU56YDR240C USB1Q12208 290 aaKnown RBP1.13□□□□□ -2.23
SNU56YDR240C FMP16Q12497 93 aa1.13□□□□□ -2.23
SNU56YDR240C DDI2P0CH63 225 aa1.12□□□□□ -2.23
SNU56YDR240C DDI3P0CH64 225 aa1.12□□□□□ -2.23
SNU56YDR240C YBR220CP38318 560 aa1.12□□□□□ -2.23
SNU56YDR240C CTR2P38865 189 aa1.12□□□□□ -2.23
SNU56YDR240C PRM10P42946 383 aa1.12□□□□□ -2.23
SNU56YDR240C YGR219WP53307 113 aa1.12□□□□□ -2.23
SNU56YDR240C NUP49Q02199 472 aa1.12□□□□□ -2.23
SNU56YDR240C PEX18P38855 283 aa1.12□□□□□ -2.23
SNU56YDR240C YKE4P40544 346 aa1.12□□□□□ -2.23
SNU56YDR240C YJR079WP47126 109 aa1.12□□□□□ -2.23
SNU56YDR240C MRH4P53166 561 aa1.12□□□□□ -2.23
SNU56YDR240C EBP2P36049 427 aaKnown RBP1.11□□□□□ -2.23
SNU56YDR240C ERV15P38312 142 aa1.11□□□□□ -2.23
SNU56YDR240C YJR012CP47087 207 aa1.11□□□□□ -2.23
SNU56YDR240C YGL034CP53186 121 aa1.11□□□□□ -2.23
SNU56YDR240C BUD25P85052 153 aa1.11□□□□□ -2.23
SNU56YDR240C GOT1Q03554 138 aa1.11□□□□□ -2.23
SNU56YDR240C ATG17Q06410 417 aa1.11□□□□□ -2.23
SNU56YDR240C SYC1Q08553 188 aaPredicted RBP1.11□□□□□ -2.23
SNU56YDR240C RPL9AP05738 191 aaKnown RBP1.1□□□□□ -2.23
SNU56YDR240C OAC1P32332 324 aa1.1□□□□□ -2.23
SNU56YDR240C FZO1P38297 855 aa1.1□□□□□ -2.23
SNU56YDR240C GLE2P40066 365 aa1.1□□□□□ -2.23
SNU56YDR240C COA1P40452 197 aa1.1□□□□□ -2.23
SNU56YDR240C RPL9BP51401 191 aaKnown RBP1.1□□□□□ -2.23
SNU56YDR240C KAP114P53067 1004 aa1.1□□□□□ -2.23
SNU56YDR240C YLR413WQ06689 675 aa1.1□□□□□ -2.23
SNU56YDR240C YPL119C-AQ3E751 87 aa1.1□□□□□ -2.23
SNU56YDR240C SIR4P11978 1358 aa1.09□□□□□ -2.23
SNU56YDR240C SSK22P25390 1331 aaPredicted RBP1.09□□□□□ -2.23
SNU56YDR240C FPR1P20081 114 aaKnown RBP1.09□□□□□ -2.24
SNU56YDR240C VPS3P23643 1011 aa1.09□□□□□ -2.24
SNU56YDR240C YKL070WP36087 169 aa1.09□□□□□ -2.24
SNU56YDR240C YBR219CP38317 127 aa1.09□□□□□ -2.24
SNU56YDR240C SVP26P38869 228 aa1.09□□□□□ -2.24
SNU56YDR240C EGD1Q02642 157 aaKnown RBP1.09□□□□□ -2.24
SNU56YDR240C NEJ1Q06148 342 aa1.09□□□□□ -2.24
SNU56YDR240C YLR179CQ06252 201 aaKnown RBP1.09□□□□□ -2.24
SNU56YDR240C YPR147CQ06522 304 aaKnown RBP1.09□□□□□ -2.24
SNU56YDR240C HIS1P00498 297 aaKnown RBP1.08□□□□□ -2.24
SNU56YDR240C DBP3P20447 523 aaKnown RBP1.08□□□□□ -2.24
SNU56YDR240C THO1P40040 218 aaKnown RBP1.08□□□□□ -2.24
SNU56YDR240C RMR1P53060 241 aa1.08□□□□□ -2.24
SNU56YDR240C GTR2P53290 341 aa1.08□□□□□ -2.24
SNU56YDR240C MRPL23Q12487 163 aaPredicted RBP1.08□□□□□ -2.24
SNU56YDR240C SWI1P09547 1314 aa1.07□□□□□ -2.24
SNU56YDR240C SSA3P09435 649 aaKnown RBP1.07□□□□□ -2.24
SNU56YDR240C VMA11P32842 164 aa1.07□□□□□ -2.24
SNU56YDR240C YNR062CP53748 327 aa1.07□□□□□ -2.24
SNU56YDR240C MSW1P04803 379 aa1.06□□□□□ -2.24
SNU56YDR240C YKR104WP0CE69 306 aa1.06□□□□□ -2.24
SNU56YDR240C DAL80P26343 269 aa1.06□□□□□ -2.24
SNU56YDR240C ERG24P32462 438 aaKnown RBP1.06□□□□□ -2.24
SNU56YDR240C MSA2P36157 363 aa1.06□□□□□ -2.24
SNU56YDR240C RPL13BP40212 199 aaKnown RBP1.06□□□□□ -2.24
SNU56YDR240C YGL159WP53110 370 aa1.06□□□□□ -2.24
SNU56YDR240C YLR162WQ06235 118 aa1.06□□□□□ -2.24
SNU56YDR240C YLR030WQ07967 263 aa1.06□□□□□ -2.24
SNU56YDR240C CSI2Q08054 341 aa1.06□□□□□ -2.24
SNU56YDR240C RRP40Q08285 240 aaKnown RBP1.06□□□□□ -2.24
SNU56YDR240C RIO1Q12196 484 aaKnown RBP1.06□□□□□ -2.24
SNU56YDR240C RPL13AQ12690 199 aaPredicted RBP1.06□□□□□ -2.24
SNU56YDR240C RPL2AP0CX45 254 aaKnown RBP1.05□□□□□ -2.24
SNU56YDR240C RPL2BP0CX46 254 aaKnown RBP1.05□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms